Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4731 ATGGCACAAGTGCAAGAAGTATTTCAAGATAAGATAGAAGACTATCATCGCTTTATGCAACTTCTCCGAGATTACAATAATAGAAGAAGGACTGATATACAGGGTGTGACAACAGAAGTAAAAGAAAATTTTGAAGGACATGATCATCTAATTTTGGGATTTAATGAATTCTTGCCCCCTCAATATCAGATACAGCTTCCAGTGGAGGAGAATCAGGAACAACGTGACTTTCAAGAAGCTTTAAACTTTGTCCGTGGAGTTAAGGTAAAATAA 273 0.3626 MAQVQEVFQDKIEDYHRFMQLLRDYNNRRRTDIQGVTTEVKENFEGHDHLILGFNEFLPPQYQIQLPVEENQEQRDFQEALNFVRGVKVK* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4731 90 Pfam Paired amphipathic helix repeat 13 58 IPR003822 GO:0006355
Amo13g4731 90 ProSiteProfiles PAH domain profile. 1 61 IPR003822 GO:0006355
Amo13g4731 90 SUPERFAMILY PAH2 domain 2 60 IPR036600 GO:0006355
Amo13g4731 90 PANTHER SIN3B-RELATED 1 88 IPR039774 GO:0003714
Amo13g4731 90 Gene3D Paired amphipathic helix 1 59 IPR036600 GO:0006355
Amo13g4731 90 PANTHER PAIRED AMPHIPATHIC HELIX SIN3-LIKE PROTEIN-RELATED 1 88 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4731 1 71 WRKY Transcription Factor Family AT4G12020 36.620 7.36e-10 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo13g4731 PAH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4731 - K11644 mdm:103421432 74.7146