Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4726 ATGGATTGTGACGGCGTCGTTTCAGGGGTGAGAATGGGAGAGGCTTCCGAAGAGGTTCACGTGTTGGCCGTTGATGACAGCCTCGTCGATCGCAAGGTCATTGAGCGCTTGCTCAAAATCCTAGCTTGTAAAGTGACTGCTGTGGATAGTGGACTGAGAGCACTGGAGTATCTTGGACTTGATCAACACAAAATTCCCTCTCAATCTAACGGTTTTGTTGAGGGTTTGAAGGTGGATCTAATTATCACGGACTACTGCATGCCCGGGATGACCGGTTACGACCTCCTCAAGAAAATCAAGGAATCTTCCACGTTCAGAGAAATTCCAGTTGTGATTATGTCCTCTGAAAATATCTTGCCGCGCATAGACAGGTGTTTGGAGGAAGGTGCAGAGGATTTCATAGTAAAGCCGGTGAAGTTATCTGACGTGAAGCGTTTGAAGGATTACGGCGTTGGTGGTAGGATCAACAAGAGGAAGCTACCAGATACTACTGAACCTGATCTCTCTTCGACACCACCGTCGGATTCCTCATCGCTACTTTCATCATCACCCTCTATTTCTCCATCTCCGCCGTCCATCGTTGATTCCCCAATCAGACGGCTCAAAATGACCACCGCCACCCATGATTGA 630 0.4825 MDCDGVVSGVRMGEASEEVHVLAVDDSLVDRKVIERLLKILACKVTAVDSGLRALEYLGLDQHKIPSQSNGFVEGLKVDLIITDYCMPGMTGYDLLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYGVGGRINKRKLPDTTEPDLSSTPPSDSSSLLSSSPSISPSPPSIVDSPIRRLKMTTATHD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4726 209 Pfam Response regulator receiver domain 21 143 IPR001789 GO:0000160
Amo13g4726 209 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 199 IPR045279 GO:0009736
Amo13g4726 209 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 14 199 - -
Amo13g4726 209 SUPERFAMILY CheY-like 19 146 IPR011006 -
Amo13g4726 209 MobiDBLite consensus disorder prediction 165 189 - -
Amo13g4726 209 ProSiteProfiles Response regulatory domain profile. 20 151 IPR001789 GO:0000160
Amo13g4726 209 Gene3D - 19 174 - -
Amo13g4726 209 CDD REC_typeA_ARR 21 146 - -
Amo13g4726 209 SMART REC_2 19 147 IPR001789 GO:0000160
Amo13g4726 209 MobiDBLite consensus disorder prediction 154 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4726 Amo-Chr13 145124088 145125445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4726 9 199 Response Regulator Gene Family AT1G59940 58.879 7.25e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo13g4726 Response_reg 1.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4726 K14492 - gmx:100527828 245.358