Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4688 ATGAAGGTGGATAGGATTGAGGAGAGTAGTGGGAGTGTGAGGTTGTTGGCAAGAAAAGGGAGCAACAGCAGTGGTGGGAGCAGTGAATCTTCAAGGTGGGTTGATGGCAGTGAAGTGGTGGATTGGGATGAGGTTCCTCCATGGTCAAGGCTCCATGATAGTGATGGTAGAGAAGGGTATGGAACAACAATTAGGAGAAGGCTTGTTAAGAAGCCCAAAAGGGTTGATTCCTTTGATGTTGAAGCCATGGAAATTGGTGGAGCTCATGGTCACCACACTAAGGATATGACCCTTTGGCCCACCCTTCTATTAGCATTTAAGACTCTTGGTGTTGTATATGGCGATATGGGAACGAGTCCTCTATACGTTTTTTCTGATGTCTTCAGCAAGGTTCCAATTGAATCAGATGTTGATGTCTTGGGGGCTTTATCATTGGTAATGTACACAATAGCTCTTGTTCCACTAGCCAAGTATGTTTTTATAGTGCTCAAAGCAAATGATAATGGAGAAGGAGGAACGTTTGCGCTATACTCGCTGATTTGTAGGTATGCAAATGTGAATATGCTACCAAATCGTCAACAAGCTGACGAGCACATATCTAGTTTTAAGCTCAAACTGCCTACTCCAGAGCTAGAAAGGGCTTTGAAAATAAAGGAGACCTTGGAAAGAAGAGCAACTTTGAAAAATATTTTGTTGGTTTTGGTTTTGTTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTAATGTCTGCCATAAGTGGTCTACAAGGTCAAGTAAAAGGATTTGGTACAGGTGCTTTGGTTGGTGTTTCAATTGCAGTCCTAGTAGCTTTGTTCAGCATCCAACAGTTTGGTACCAGTAAAGTGGGTTTCATGTTTGCTCCAGTTCTTGCTTTATGGTTCTTTTCTCTGGGTTCTATTGGACTATATAACATATTTAATTATGATGTTACGGTTCTGAGAGCTATCAATCCAGCTTATGTATATTATTTCTTCAATAAAAATGGCAAAGCTGCATGGTCAGCTCTTGGTGGTTGTGTTTTGTGTATTACAGGTGCAGAAGCAATGTTTGCAGACCTGGGTCATTTTTCTGTACCAGCAATACAGATTGCTTTCACTAGTGTGGTATTTCCTTGTCTCCTCCTAGCTTATATGGGCCAAGCTGCTTATTTGATGAAGAATCCCCATTCTTATTCAAGGATATTCTATGATTCTGTTCCAGAAAGTCTCTTCTGGCCAGTGTTTGTTGTAGCCACACTAGCTGCTATGATTGCCAGTCAAGCAATGATATCGGCTACATTTTCGTGTGTAAAGCAATCTATGGCTTTAGGATGCTTCCCCAGGCTCAAGATAATTCATACCTCGAGAAAGTTCATGGGACAAATTTACATCCCTGTAATGAACTGGTTTCTAATGATCATGTGCATAATTGTTGTTTCAATCTTCCAAAGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTTAGCACTGCCTTGGTGACACTTGTAATGCTTCTGATTTGGCAGACTAATCTGTTTTTGGCGCTGTGTTTCCCATTACTATTTGGTTCCGTGGAGCTGATTTACATGTCTGCTGTCCTCTCGAAGCTCTTTGAAGGCGGCTGGCTTCCTCTTGCCTTTGCTACTTTCTTCCTCTCCGTGATGTACACGTGGAACTATGGCAGTGTATTGAAGTACCGGAGCGAAGTCAGAGAGAAAGTCTCATCAGACTTGATGCTTGATCTTGGCTCCAATCTTGGAACACTAAGAGTTCCCGGAATTGGATTGTTATATAATGAGCTTGTCCAAGGCATTCCCTCCATTTTCTTGCAGTTCTTGCTAAGCCTTCCTGCTATTCACTCTACCATAGTTTTTGTCTGCATTAAATATGTTCCAATCCCTGTGGTTCCTCAGGAGGAAAGGTTTCTGTTTCGAAGAGTTTGCCCGAAAGATTACCATATGTTCCGGTGTGTTGCAAGGTATGGTTACAAAGATGTAAGGAAAGAAGATCACCACGCATTCGAGCAACTTCTCATTGAGAGCCTTGAGAAATTCTTGAGAAGGGAAGCTCAAGAAGCTGCCTTAGAATTGGAGGGTGCATTAACCGAAGAAACGGATAATGTGTCAGTGAAATCAATGGATACTGAACATCATCCTGATACAGAGGAGCTTCGGATTCCACTTATGCAAGGTCAAAATTTAGAAGGAGAAGGAACTACTTCTACCTCTAAGGAACCTGCATCATTAGCATTGCCATTAGCATTACCTTCCAGTTATATGTCATCTTCGGCCGAAGATCCTGGTCTCGAGTATGAGCTCTCGGCCCTAAGAGAAGCAATGGAATCAGGATGCACCTATTTGCTTGGACATGGAGATGTGAGGGCAAAGAAGAACTCTTTCTTCTTTAAGAAGTTAGTGATAAACTATTTCTATGGATTTCTTAGGAAGAACTGCAGAGGCGGCACGGCGAACATGAAAGTCCCTCACACCAATATCATTCAAGTTGGGATGACATATATGGTCTGA 2565 0.4211 MKVDRIEESSGSVRLLARKGSNSSGGSSESSRWVDGSEVVDWDEVPPWSRLHDSDGREGYGTTIRRRLVKKPKRVDSFDVEAMEIGGAHGHHTKDMTLWPTLLLAFKTLGVVYGDMGTSPLYVFSDVFSKVPIESDVDVLGALSLVMYTIALVPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNMLPNRQQADEHISSFKLKLPTPELERALKIKETLERRATLKNILLVLVLLGTSMIIGDGILTPAISVMSAISGLQGQVKGFGTGALVGVSIAVLVALFSIQQFGTSKVGFMFAPVLALWFFSLGSIGLYNIFNYDVTVLRAINPAYVYYFFNKNGKAAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTSVVFPCLLLAYMGQAAYLMKNPHSYSRIFYDSVPESLFWPVFVVATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVMNWFLMIMCIIVVSIFQSTTDIANAYGIAEVGVMMVSTALVTLVMLLIWQTNLFLALCFPLLFGSVELIYMSAVLSKLFEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVREKVSSDLMLDLGSNLGTLRVPGIGLLYNELVQGIPSIFLQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRREAQEAALELEGALTEETDNVSVKSMDTEHHPDTEELRIPLMQGQNLEGEGTTSTSKEPASLALPLALPSSYMSSSAEDPGLEYELSALREAMESGCTYLLGHGDVRAKKNSFFFKKLVINYFYGFLRKNCRGGTANMKVPHTNIIQVGMTYMV* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4688 854 Pfam K+ potassium transporter 105 678 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g4688 854 PANTHER POTASSIUM TRANSPORTER 12-RELATED 15 854 - -
Amo13g4688 854 MobiDBLite consensus disorder prediction 15 34 - -
Amo13g4688 854 MobiDBLite consensus disorder prediction 1 36 - -
Amo13g4688 854 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 854 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g4688 854 Coils Coil 700 720 - -
Amo13g4688 854 MobiDBLite consensus disorder prediction 719 759 - -
Amo13g4688 854 TIGRFAM kup: potassium uptake protein 104 853 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo13g4688 854 MobiDBLite consensus disorder prediction 722 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4688 Amo-Chr13 144560864 144566255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4688 3 854 Inorganic Solute Cotransporters AT1G60160 74.065 0.0 1249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4688 K03549 - gmx:100814419 1360.13