Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4685 ATGGCTTCTTCTTCAACCAGGATCTCCAGGCTTCTCTCTCGCTCCTCCGCCTCTCTCTTTTCGCGAGGTGGGAAGGGTTACCTTGGTGCAGGATTCAGCAGATATAGCACTGCCACTGCCCTTGAAGAAGAACCAATAAAACCAGCAGTGCAAGTAGAACACACCCAACTCCTGATTGGTGGGAAATTCGTTGATGCTCTTTCTGGTAAAACTTTTCCAACCTTGGATCCAAGAACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCAGTTGCAGCCGCAAGAAAGGCATTTGATCAAGGGCCATGGCCTAAGATGACAGCCTATGAAAGGCAAAGGATATTGTTGCGAGCTGCCGATCTGCTTGAGAAGCACAATGATGAGCTTGCAGCACTTGAGACCTGGGATAATGGGAAGCCATATGAACAATCTGCTCAGATTGAAATCCCAATGCTTGTTCGCCTTTTCCGGTACTATGCTGGTTGGGCAGATAAGATCCATGGTATGACCGTTCCGGCTGATGGGCAATATCATGTGCAAACATTGCACGAACCGATCGGTGTTGCTGGTCAGATCATTCCCTGGAATTTCCCTCTCCTCATGTTTGCTTGGAAGGTTGGACCGGCATTGGCCTGTGGCAATACAATTGTTCTCAAAACCGCTGAGCAGACACCATTGTCTGCTTTGTACGCAGCAAAACTATTTCATGAGGCTGGACTTCCTGAAGGTGTTTTGAATGTGGTATCAGGCTTTGGTCCCACTGCTGGCGCTGCTCTTGCAAGTCACATGGATGTGGATAAGCTTGCCTTTACTGGTTCTACTGATACCGGGAAAGTTGTCCTTGAGCTAGCGGCTAGAAGCAATCTTAAGCCAGTAACTTTGGAGCTTGGTGGAAAATCTCCTTTTATTGTATGTGAGGATGCCGATGTAGATCAGGCGGTTGAGCTAGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTAGGACATATGTACATGAACGTGTATATGACGAGTTTGTAGAGAAAGCAAAGGCTCGTGCTTTGAAACGTATTGTTGGTGATCCATTCAAGAGTGGAATAGAGCAAGGTCCTCAGATTGATTCTGAACAATTTGAGAAGATACTGAAGTATATCAGATCCGGCGTTCAAAGTGGAGCTACACTAGAAACCGGAGGAGATAGACTTGGCAGCAAGGGCTTCTATGTTCAGCCTACCGTCTTCTCAAATGTTGAGGATGGCATGCTGATTGCAAAGGAAGAAATATTTGGCCCGGTGCAATCCATACTAAAATTCAAGGACCTCGATGAGGTTATTGAAAGAGCGAACAACACGCGGTATGGACTGGCGGCAGGGGTGTTCACGAAGAACATAGACACGGCGAACACGCTGACGAGAGCGTTGAGAGTTGGAACAGTTTGGGTGAACTGCTTTGACACATTTGATGCAGCAATTCCATTTGGTGGTTACAAGATGAGTGGGCAGGGAAGGGAAAAGGGAGAGTACAGCCTCAAGAATTACTTGCAAGTCAAGGCAGTTGTTACCCCTTTGAAGAACCCTGCTTGGCTTTAG 1608 0.4714 MASSSTRISRLLSRSSASLFSRGGKGYLGAGFSRYSTATALEEEPIKPAVQVEHTQLLIGGKFVDALSGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGMTVPADGQYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPEGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFVEKAKARALKRIVGDPFKSGIEQGPQIDSEQFEKILKYIRSGVQSGATLETGGDRLGSKGFYVQPTVFSNVEDGMLIAKEEIFGPVQSILKFKDLDEVIERANNTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4685 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Amo13g4685 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 23 535 - -
Amo13g4685 535 Pfam Aldehyde dehydrogenase family 65 525 IPR015590 GO:0016491
Amo13g4685 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 69 525 IPR016162 GO:0016491
Amo13g4685 535 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 23 535 - -
Amo13g4685 535 CDD ALDH_F2BC 52 527 - -
Amo13g4685 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
Amo13g4685 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Amo13g4685 535 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4685 Amo-Chr13 144528722 144532681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4685 4 535 Aldehyde Dehydrogenase Gene Family AT3G48000 78.212 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4685 K00128 - gmx:100777399 969.918