Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4668 ATGAAGGCATGGGTGTACGGTGAGTATGGCGGTGTTGACGTGTTGAAGTTTGATTCCAGTGTTGTGTGTAAGGATGGACTATGTTTTGTTAAGGTTGTTGCTGCTGCTCTTAACCCTGTTGATGCCAAGAGAAGGCAGGGAAAGTTCAAGGCCACTGATTCTCCTCTTCCGACTGTTCCGGGGTACGATGTTGCCGGAGTGGTGGTGAAGGTTGGTAGCAAAGTAAAGGATTTCAARGTGGGTGATGAAGTATATGGTGATGTTAATGAGAAAGCACTTGAAGGGCCTAAGCARTTTGGGTCTTTAGCTGAGTACACTGCTGTTGAGGAGAGATTGTTAGCACCAAAACCAAAGAACTTGAACTTTGCTGAGGCTGCTTCTCTYCCTCTTGCAATTGAGACTGCTTATGAGGGTTTGGAGAGGCTTGGATTCTCCCCTGGTAAATCCATTCTTGTTCTAAATGGTTCTGGTGGTGTTGGAACCCTAGTCATTCAGCTAGCTAAGAAAGTTTTTGGGGCTTCAAGAGTTGCTGCCACTTCAAGCACCAGAAATTTGGAGCTGTTGAAAAGCTTGGGAGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGACTTGCCAGAAAAATTTGATGTYGTTTATGATGCCATTGGGCAATGTGAGARGGCAGTGAAGGCAGTGAAAGAAGGTGGGAGTGTGGTGGCACTAACAGGAGCAGTTACACCACCTGGGTTCAGATTTGTGGTTACTTCCAATGGAGCTGTTCTCAGGAAACTGAACCCTTACTTGGAGAGTGGACAAGTAAAGCCAGTTGTGGATCCCAAAGGTCCCTTCTCCTTTGCTCAGCTTGYTGAAGCCTTCACTTACCTTGAAACAAACCGTGCTACTGGAAAGGTCGTCATAAGTCCCATCCCATAA 921 0.4571 MKAWVYGEYGGVDVLKFDSSVVCKDGLCFVKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSKVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEERLLAPKPKNLNFAEAASLPLAIETAYEGLERLGFSPGKSILVLNGSGGVGTLVIQLAKKVFGASRVAATSSTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCEXAVKAVKEGGSVVALTGAVTPPGFRFVVTSNGAVLRKLNPYLESGQVKPVVDPKGPFSFAQLXEAFTYLETNRATGKVVISPIP* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4668 306 Gene3D - 8 302 - -
Amo13g4668 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 120 242 IPR036291 -
Amo13g4668 306 Pfam Zinc-binding dehydrogenase 191 302 - -
Amo13g4668 306 SUPERFAMILY GroES-like 1 152 IPR011032 -
Amo13g4668 306 CDD MDR_like_2 1 302 - -
Amo13g4668 306 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 306 - -
Amo13g4668 306 SMART PKS_ER_names_mod 10 302 IPR020843 GO:0016491
Amo13g4668 306 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 147 168 IPR002364 GO:0008270|GO:0016491
Amo13g4668 306 Gene3D - 139 253 - -
Amo13g4668 306 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 306 IPR044626 GO:0016628
Amo13g4668 306 Pfam Alcohol dehydrogenase GroES-like domain 29 88 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4668 Amo-Chr13 144296727 144300239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4668 26 217 Monolignol Biosynthesis Gene Families AT1G72680 27.602 1.57e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4668 K18980 - gmx:100780585 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4668 13 144296727 144300239 Amo13g4668 13 144296727 144300239 ECH