Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4665 ATGGATTCAGCACCCTTTGTGGTTGTCCTCCTTCTCTTGTTCCTCTCTTGCTTATCAACTCCTTCGCTCTCGGACCCCAGAGCCACAAGGGCGGCCTTGCTCTGCACCAACAGGACCGAACCTGCTCCTTCCCGTCAACTCTTCGTATCAAACTTCCTTGCTGCCATGGACGCACTTACCCCTCTCATCTCAACTAAAAGGTACGGAGCAGTTATCAACGGGACTCGCAACTTAACGGTCTACGCCTTCGGCCAGTGCATGAACGATCTGTCTCAGCAAGACTGCAACATGTGCTTCGCCCAGTGCAAGACACAGATCCTCACCTGCCTTCCCTTCCAGAAAGGGACACGTGGCGGCTCTCTCTTCTTCGATGGCTGCTACCTCAGGTACGATGATTACAACTTCTTCAACGAGAGCGTCACCGATCGAGACACCTCGGTATGTAACGGCACCAGTAACAGAAACGGCGTCGTTTACAAGCGCAATGCTTTGGAGTTGGTGAGCAACTTGAGTCATCTGGCGCCCAAGAACGGCGGCTTCTTCGTTGGCTCATTCAGCCGCAAGAATGTGAGTGTTTATGGATTGGCTCAGTGCTGGAAATTTGTTAATGCAACTTCCTGTAAGAGCTGTTTGGCTGATGCTGTAACTAGAATCGATTCGTGTCCTCCCAAAGAAGAAGGGAGGGCGATGAATACTGGTTGTTACATGAGGTATTCCTCACAGAAGTTTTATTACAATTCAACCACTGTTGCTTCTTCTTCTGGGAATCATGGACGGCGCAAGCTAGCTATAATTCTGGCTGCATCTTGTGCTGCCCTGGCTCTTGTTCTGGCTGCTGCAACATTTGTTTACTTTGCAAGGAAGAATCTACTCAAGAGAAGAAGAGATAGGCGACAGTTTGGTGCACTGTTGGACAGAGTGAACKGGTCCAAGCTAAATATGGCATATGAAATCCTTGAAAAAGCTACAAATTACTTCAATGATGCAAATAAACTAGGACAAGGTGSATCAGGCACAGTTTATAAAGGAGTTCTGCCTGATGGAAATGTTGTGGCCATAAAAAGGCTTAGCTTTAACACAACACAATGGGCAGATCTTTTCTTCAATGAGGTCAATTTGATAAGTGGTGTTCATCACAAGAATCTTGTAAAGCTTTTGGGATGCAGCATTACAGGACCCGAAAGCCTTTTGGTTTATGAATATGTGCCTAACCAGAGTCTCCATGATCACTTTTCAGCTAGGAGGATTTCGCAGCCATTGACTTGGGAAGTGAGGTACAAGATCATACTAGGAATTGCTGAGGGCCTGGCCTATCTTCATGAGGAGTCTCATGTTAGAATCATTCATAGAGACATAAAATTAAGCAACATTCTGCTAGACAATGACTTCACACCGAAGATTGTGGATTTTGGTCTTGCTAGATTGTTTCCTGAAGATAAGTCTCACCTTAGCACAGCCATTGCTGGCACACTCGGTTATATGGCTCCAGAATATATAGTTTGTGGGAAGTTGACTGCAAAAGCGGATGTATTTAGTTTTGGAGTTCTAGTTGTTGAAATTGTATCTGGCAGAAAAAACAGCTCCTTCATCGCCAATTCATCCTCTATCCTACAAACGTTGTGGAGCCTTTTCGGATCAAATAGGCTAGCCGAAATCGTTGATCCAGCCCTCGAGGGTAACTTCCCTTCAGAGGAAGCATGCAGACTYCTGCAGATAGGGTTGCTTTGCGCGCAAGCATCTGCAGAGCTGCGACCATCGATGTCAGCAGTTGTTCAAATGATTAACAATAYCCACGAAATTCCTCAGCCYACGCAACCGCCGTTTCTTAATTCTAGTTCTTCAGAACTCAGCAAATCAAGTTTGCCTGGATATAATTTTCAGCCAGGATCCATGACTCAGTCTTCAGGGGACAGCATGACAGAGAGTCTTATTGAGCCTAGATGA 1944 0.4588 MDSAPFVVVLLLLFLSCLSTPSLSDPRATRAALLCTNRTEPAPSRQLFVSNFLAAMDALTPLISTKRYGAVINGTRNLTVYAFGQCMNDLSQQDCNMCFAQCKTQILTCLPFQKGTRGGSLFFDGCYLRYDDYNFFNESVTDRDTSVCNGTSNRNGVVYKRNALELVSNLSHLAPKNGGFFVGSFSRKNVSVYGLAQCWKFVNATSCKSCLADAVTRIDSCPPKEEGRAMNTGCYMRYSSQKFYYNSTTVASSSGNHGRRKLAIILAASCAALALVLAAATFVYFARKNLLKRRRDRRQFGALLDRVNXSKLNMAYEILEKATNYFNDANKLGQGXSGTVYKGVLPDGNVVAIKRLSFNTTQWADLFFNEVNLISGVHHKNLVKLLGCSITGPESLLVYEYVPNQSLHDHFSARRISQPLTWEVRYKIILGIAEGLAYLHEESHVRIIHRDIKLSNILLDNDFTPKIVDFGLARLFPEDKSHLSTAIAGTLGYMAPEYIVCGKLTAKADVFSFGVLVVEIVSGRKNSSFIANSSSILQTLWSLFGSNRLAEIVDPALEGNFPSEEACRLLQIGLLCAQASAELRPSMSAVVQMINNXHEIPQPTQPPFLNSSSSELSKSSLPGYNFQPGSMTQSSGDSMTESLIEPR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4665 647 SUPERFAMILY Protein kinase-like (PK-like) 314 627 IPR011009 -
Amo13g4665 647 CDD STKc_IRAK 332 596 - -
Amo13g4665 647 ProSiteProfiles Protein kinase domain profile. 326 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4665 647 Gene3D Phosphorylase Kinase; domain 1 287 401 - -
Amo13g4665 647 ProSiteProfiles Gnk2-homologous domain profile. 141 243 IPR002902 -
Amo13g4665 647 MobiDBLite consensus disorder prediction 601 641 - -
Amo13g4665 647 Pfam Salt stress response/antifungal 42 133 IPR002902 -
Amo13g4665 647 Pfam Salt stress response/antifungal 148 240 IPR002902 -
Amo13g4665 647 Pfam Protein kinase domain 327 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4665 647 Gene3D Transferase(Phosphotransferase) domain 1 402 605 - -
Amo13g4665 647 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 634 - -
Amo13g4665 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 19 634 - -
Amo13g4665 647 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
Amo13g4665 647 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Amo13g4665 647 Gene3D - 141 243 IPR038408 -
Amo13g4665 647 Gene3D - 30 135 IPR038408 -
Amo13g4665 647 SMART serkin_6 326 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4665 647 MobiDBLite consensus disorder prediction 601 647 - -
Amo13g4665 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4665 Amo-Chr13 144203485 144206794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4665 20 491 Receptor kinase-like Gene Family AT1G70530 59.283 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo13g4665 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4665 - - gmx:100305402 937.947