Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4628 TTCTATTTCATTATTCTTATCTCATTAATTATCAATCATAGCAGTAGTTCAAGTGTGAAACTAGCTTATAGTTTGCTGCAAAAAGCAAGCCAGAAAAATACTCAAGATCTTCATTTTCAACCAAAAAGATTAAAATTTTTGGAATCTATCTCACACACATTAGTTAGCTGCTTGATGAAAGTCCCAGCAATGGAAAAGAAACTAGTCTCTCTTGTCTATCCCCAGATCCTTGTTTTCCTCCTCATCAAATCTCTGTTACTGTTAGATTCAGTGGTAGCAGAACCAAGGGCCAAAACAGTTGAAGTAACATGTGGCCATCAACTAGAGCACAACACTACCATCTTTGTTCCGAATTTCATTGCAACCATGGAGAAGATAAGCCAACAAATGCGCAGTACCGGCTACGGCACAGCAGTTACAGGGACAGGACCAGACATAGACTATGGCCTGGCACAGTGCTATGGAGATCTTTCACTTCTTGATTGTGTGTTATGTTATGCTGAGGCACGCACGGTTCTTCCTAAATGCTTCCCAAACAATGGTGGCCGCATATTTCTTGATGGATGCTTCATGAGGTCTGAAAATTATAGCTTCTTTGATGAGTATGCAGGGCCAGGGGACAAGGCTGTTTGTGGCAACAAAACTAGGAAGAACTCGAGTTTTCAAGCGGCCGCGAAGCAGGCGGTTTTGGAAGTAGTTCAAGCTGCACCAAACAGCAAAGGATACTATGCAAGAGGGAAGGTTGATGTTTCTGGAAGGGTAAATGAATCTGCTTATGTTTTGGCTAATTGTTGGAAGAGTTTGAACAGTAGTTCTTGCAAAGTATGTCTTGAGAATGCTTCTAAATCTGTGTTGAAATGCTTGCCTTCTTCAGAAGGTAGAGCACTGAACACTGGCTGCTTCATGAGGTATTCTGACACAGATTTTCTTAACAAGGAGCAGAATAATGGAAGATCAAGAGGTACTCTTATAGTGATAGTGGTTGCAGTAGTTAGTGCAGTGATTGTTTTGGTAGTTGGAATAGCTATTGGGGTCTATATAAGGAAAGATAGATACATTCAAAGAAAAAGAAGAGGTTCAAATGATGCAGAGAAGTTGGCTAAGACACTTCACCGCAACAGCTTGAATTTCAAGTACTCTACACTGGAGAAGGCTACCAACTCCTTCAACGAAGCGAACAAGCTTGGACAGGGAGGATTTGGATCGGTTTATAGAGGTGTTCTGCCTGATGGAAGAGAAATTGCCATCAAGAGGTTGTACTTCAACAACAGGCATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGCGTGGAGCACAAGAATCTAGTGAGGTTGTTAGGATGCAGCTGTTCTGGACCCGAAAGCTTGCTCGTATATGAATTTCTACCGAACAAAAGTCTTGATCAATTTATTTTTGATAGAGTCAAGGGAAGAGAACTAAACTGGGAGAAGAGATATGACATTATCATTGGGACAGCTGAAGGATTGGTTTACCTGCATGAGAATTCAAAAACTAGGATAATTCATAGAGATATAAAAGCCAGCAACATCTTACTGGATGCTAAACTTCGCGCCAAAATTGCTGATTTTGGACTGGCCAGGTCCTTTCAAGAAGATAAGAGTCACATTAGCACGGCTATAGCCGGAACTCTGGGTTACATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTATATAGTTTTGGAGTGTTAGTCTTAGAAATAGTTACTGGGAGACAGAATAACAGAAGCAAATCAACAGAATACTCAGACAGCATAGTTATACTGACATGGAGGCATTTCCAATCAGGGACAGCAGAAGAGCTATTTGATCCAAATCTAGCTTCAGATGACAACAATAATGTTAATAAGAAGGATGAGATTTTAAGAGTGGTGCACATAGGACTTCTATGCACACAAGAGAACCCTTCCTTGAGGCCAACCATGTCAAGGGCACTACAGATGCTAACAAAGAAGGAAGAGAATCTTGCACGTCCCTCTAATCCACCCTTCACAGATGAGAACACAATGGAACTCAATGACACTGTTGATAACCCATTTTGCCCTCTCAATAATGCAACATATTCATCAGAGGCTACTATGTCCCATAGTTCTTTCTATGCAAGGTGA 2154 0.4104 FYFIILISLIINHSSSSSVKLAYSLLQKASQKNTQDLHFQPKRLKFLESISHTLVSCLMKVPAMEKKLVSLVYPQILVFLLIKSLLLLDSVVAEPRAKTVEVTCGHQLEHNTTIFVPNFIATMEKISQQMRSTGYGTAVTGTGPDIDYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPNNGGRIFLDGCFMRSENYSFFDEYAGPGDKAVCGNKTRKNSSFQAAAKQAVLEVVQAAPNSKGYYARGKVDVSGRVNESAYVLANCWKSLNSSSCKVCLENASKSVLKCLPSSEGRALNTGCFMRYSDTDFLNKEQNNGRSRGTLIVIVVAVVSAVIVLVVGIAIGVYIRKDRYIQRKRRGSNDAEKLAKTLHRNSLNFKYSTLEKATNSFNEANKLGQGGFGSVYRGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDQFIFDRVKGRELNWEKRYDIIIGTAEGLVYLHENSKTRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLVLEIVTGRQNNRSKSTEYSDSIVILTWRHFQSGTAEELFDPNLASDDNNNVNKKDEILRVVHIGLLCTQENPSLRPTMSRALQMLTKKEENLARPSNPPFTDENTMELNDTVDNPFCPLNNATYSSEATMSHSSFYAR* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4628 717 Pfam Salt stress response/antifungal 211 306 IPR002902 -
Amo13g4628 717 Pfam Salt stress response/antifungal 114 196 IPR002902 -
Amo13g4628 717 ProSiteProfiles Protein kinase domain profile. 389 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4628 717 SMART serkin_6 389 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4628 717 ProSiteProfiles Gnk2-homologous domain profile. 203 309 IPR002902 -
Amo13g4628 717 Gene3D Transferase(Phosphotransferase) domain 1 465 675 - -
Amo13g4628 717 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 76 696 - -
Amo13g4628 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Amo13g4628 717 ProSiteProfiles Gnk2-homologous domain profile. 97 198 IPR002902 -
Amo13g4628 717 Pfam Protein tyrosine and serine/threonine kinase 392 662 IPR001245 GO:0004672|GO:0006468
Amo13g4628 717 CDD STKc_IRAK 395 666 - -
Amo13g4628 717 SUPERFAMILY Protein kinase-like (PK-like) 373 685 IPR011009 -
Amo13g4628 717 Gene3D Phosphorylase Kinase; domain 1 350 464 - -
Amo13g4628 717 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 76 696 - -
Amo13g4628 717 Gene3D - 208 309 IPR038408 -
Amo13g4628 717 Gene3D - 97 198 IPR038408 -
Amo13g4628 717 ProSitePatterns Protein kinases ATP-binding region signature. 395 417 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4628 Amo-Chr13 143700578 143704287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4628 68 717 Receptor kinase-like Gene Family AT1G70520 66.769 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo13g4628 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4628 - - aip:107631343 1348.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4628 13 143700578 143704287 Amo13g4628 13 143700578 143704287 ECH