Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4626 ATGGAAAGAGAGGTCGCGGCTAATTACAAAGATGTGGGGAGCACGATGTTCTTTTCGTCGTCCACTAGCATGGAAAATAATGTGGTTGGTAGTGGGTCTTACTCACTGGGTTTATGGTGCGTTGCCATGCCCAATCCAATTCCAAGCATGGAAGTGGAAGTGCCAGCAGTAGCAGAAGGCAGCAACGAAACTCAAAAATGGAGTGTGGCAGTGGATTCAGAGAACAAGGCCACAGAATTCAGACTGATGTCCATAGCCAAACCACACATGAGAGCATTCCACCTCTCATGGATCTCCTTCTTCTCATGCTTTGTCTCCAGCTTTGCAGCACCGCCCCTCCTCCCCATCATCCGGGACAATCTCAACCTCACCGCCACAGACATCGGCAATGCAGGAGTGGCCTCAGTCTCCGGCGCCGTCTTCGCAAGAGTAGCCATGGGGACAGCCTGTGACTTGGTGGGCCCTCGCCTGGCCTCCGCCTCCCTCATTCTCCTAACTGCACCGGCTGTCTACTGCACCTCACTCATCAACTCAGCCACCTCCTATCTCCTTGTCCGCTTCTTCACCGGATTCTCCTTAGCTACCTTCGTGTCCACGCAATTCTGGATGAGTTCCATGTTCTCTGCCCCTGTTGTAGGCAGAGCAAATGGATTCTCCGGCGGATGGGGGAACCTTGGAGGAGGCGCAACCCAACTCATCATGCCATTAGTCTTTTCCCTCGTCCGAGACATCGGCGCCGCACAATTCACGGCCTGGAGAATCGCATTCTTTGTCCCTGCGTTCTTCCAGATGCTCACAGCATTCTCTATATTAATATTTGGACAGGACACGCCAGACGGCAACTTCCAGAGGCTAAAGAAGTCAGGGCAGAAACCAAAAGATGAATTCTCAAAAGTTCTTTTCCATGGTGTAACTAACTATAGAGGCTGGATTCTGGCGTTGACTTATGGATACTGCTTTGGTGTGGAGTTGACTATTGATAACATCATAGCTGAGTACTTCTATGACAGATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCCAGTTTCGGATTGGCGAATCTGTTCTCCAGGCCCGGTGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGGTAGGCTCTGGGCCTTGTGGCTTTGCCAAACATTCGCTGGTGTCCTCTGCATAATTCTTGGGCTTGTTGGATCTTTGAGTGTTTCTGTTGTTGTTATGATCATATTCTCTGTGTTTGTTCAAGCTGCTTGTGGCATGACCTTTGGAATTGTTCCTTTTGTCTCAAGAAGGTCATTAGGAGTGATATCAGGAATGACAGGAGGAGGAGGGAATGTGGGTGCAGTTGTGACCCAACTAATATTCTTCAAAGGATCAAAATTTTCAAAAGAGAGGGGAATTACACTGATGGGTGTGATGATCATAATATGCACCCTCCCCATATGTCTAATATATTTCCCGCAGTGGGGTGGCATGTTCTTTGGTCCATCATCAAAGAAAGTTACAGAAGAAGACTACTATCTTGGTGAGTGGAACTCAAAGGAGCAAGAGAAAGGGTCACACCATGCAAGCTTGAAGTTTGCTGATAATAGTGTTAGTGAGAGAGGCAGAAAACACAACACTTCAACAAGACCTAATGATGAACCAACACCAACATATGTTTGA 1674 0.4815 MEREVAANYKDVGSTMFFSSSTSMENNVVGSGSYSLGLWCVAMPNPIPSMEVEVPAVAEGSNETQKWSVAVDSENKATEFRLMSIAKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARVAMGTACDLVGPRLASASLILLTAPAVYCTSLINSATSYLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGRANGFSGGWGNLGGGATQLIMPLVFSLVRDIGAAQFTAWRIAFFVPAFFQMLTAFSILIFGQDTPDGNFQRLKKSGQKPKDEFSKVLFHGVTNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANLFSRPGGGFISDAVSKRFGMRGRLWALWLCQTFAGVLCIILGLVGSLSVSVVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSKFSKERGITLMGVMIIICTLPICLIYFPQWGGMFFGPSSKKVTEEDYYLGEWNSKEQEKGSHHASLKFADNSVSERGRKHNTSTRPNDEPTPTYV* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4626 557 Gene3D MFS general substrate transporter like domains 84 283 IPR036259 -
Amo13g4626 557 Gene3D MFS general substrate transporter like domains 294 493 IPR036259 -
Amo13g4626 557 SUPERFAMILY MFS general substrate transporter 85 488 IPR036259 -
Amo13g4626 557 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 54 542 IPR044772 GO:0015112
Amo13g4626 557 Pfam Major Facilitator Superfamily 97 453 IPR011701 GO:0022857|GO:0055085
Amo13g4626 557 CDD MFS_NRT2_like 93 486 IPR044772 GO:0015112
Amo13g4626 557 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 54 542 - -
Amo13g4626 557 MobiDBLite consensus disorder prediction 518 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4626 Amo-Chr13 143688903 143694079 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4626 50 549 Inorganic Solute Cotransporters AT1G12940 71.571 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4626 K02575 - gmx:100787888 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4626 13 143688903 143694079 Amo13g4626 13 143688903 143694079 ECH