Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4603 ATGGAAGATGAGAACTTTGACCCTGCAACCTCAAGCCTTATGTGTCTGGAAAACAATAACACATGCTTTGATGATTTTGAATGTAGTGCCGCAGATGGGTACCACAAAAAACTTAACTTTAACGATGATGGATCGGAACCATTCGTGGGGTTTCTGGTGCTGAGTGATGAAACTTTTGGGGTTATGGTTGAGAAGGAGATAGAGTTTTTGCCCACTGATGATTACCTCAGGAGGATCCTTGGTGGGGATTTGGACTTTGGTGTTAGGAGGGATGCTCTTGATTGGATTTGTAAGGCTCATGCTTATTATGGTTTTGGACCCAGTTGCTTTTGTCTATCTGTGAACTACTTGGATCGGTTCCTATCAGTACGTGATATTCCAAGAGACAAAAGAAATTGGGCTGTGCAGTTGTTAGCTTTAGCTTGTTTATCAATTGCAGCCAAGATGGAAGAGACTAAAATGCCCCATGTTATAGATATGCAGGATGACGAAACAACAGCTGTGTTTGATGCTAAAACTATTCAAAGAATGGAACTGATGATATTAACCACACTGAGTTGGAAAATGCAAGCCATAACTCCGTGTTCCTTTATGGACTACTTCCTTGGCAAGATCAGTCGTGAGCAGCATCTGGCAAAGTCATTGGTTTTGAGATCAATGGAGCTCATAGTTCAAATTATCAGATATGTTGAATTCTTGGAGTTTCGGCCTTCTGATATTGCCGCAGCAGTTGCGATTTCTGTGTTGAGGGAATCACAAGGAATAGATATTGATAAAGCCTTGAATTGTTTTGTCATCGCGCGGAAGGACAGAGTCTTGAAGTGCATTGAACTGATCAGAGACTTAGCCTTGACAAAAATTCCGGCTAATTCGACTGGCAACTTAGCTCCATTAGCACCGCAAAGCCCCCTCGGGGTGCTCGATGCGACATGCTTGAGCTATAGAAGTGAGGAATCAACAACAGTTGGTGGTTCATTCACAGATTCCTTCCAATATAGTCCAAGAGCTAAGAGGTGTAGATCAGAAAATGGACCTTCTAATGAGAATTTCAGGTCATGA 1059 0.423 MEDENFDPATSSLMCLENNNTCFDDFECSAADGYHKKLNFNDDGSEPFVGFLVLSDETFGVMVEKEIEFLPTDDYLRRILGGDLDFGVRRDALDWICKAHAYYGFGPSCFCLSVNYLDRFLSVRDIPRDKRNWAVQLLALACLSIAAKMEETKMPHVIDMQDDETTAVFDAKTIQRMELMILTTLSWKMQAITPCSFMDYFLGKISREQHLAKSLVLRSMELIVQIIRYVEFLEFRPSDIAAAVAISVLRESQGIDIDKALNCFVIARKDRVLKCIELIRDLALTKIPANSTGNLAPLAPQSPLGVLDATCLSYRSEESTTVGGSFTDSFQYSPRAKRCRSENGPSNENFRS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4603 352 Pfam Cyclin, C-terminal domain 192 285 IPR004367 -
Amo13g4603 352 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Amo13g4603 352 SMART cyclin_7 94 183 IPR013763 -
Amo13g4603 352 PANTHER CYCLIN-D4-1-LIKE 49 342 - -
Amo13g4603 352 MobiDBLite consensus disorder prediction 320 352 - -
Amo13g4603 352 SUPERFAMILY Cyclin-like 52 189 IPR036915 -
Amo13g4603 352 Gene3D - 72 190 - -
Amo13g4603 352 Gene3D - 62 277 - -
Amo13g4603 352 PANTHER CYCLINS 49 342 IPR039361 -
Amo13g4603 352 SMART Cyclin_C_2 192 315 IPR004367 -
Amo13g4603 352 MobiDBLite consensus disorder prediction 320 336 - -
Amo13g4603 352 Pfam Cyclin, N-terminal domain 59 189 IPR006671 -
Amo13g4603 352 CDD CYCLIN 89 182 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4603 Amo-Chr13 143275089 143277650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4603 34 321 Core Cell Cycle Gene Families AT2G22490 47.492 3.41e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4603 K18810 - gmx:100800570 369.007