Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4592 ATGAATGGTAGAGCAGAGAGAGAGAAAATCTATGTCGCCCTTGGGAATAATGTGCTTGAAGGAATTCACACTTTGGCTTGGACTCTCAGTAAATGGCACTCTCACCCAATTTCCATAATCATTCTGCATGTCAAATACAATAACACTTGCAACCATCTTTCAACACTACTTGGGAATTTCCCAGAAGGCATTGCTTGTGATGTTAAAATGGAGAGAATCCGGAAAGGCGAGGAAGACAAAATCGACAAGATGCTTTCCAAGTATATATCCTTCTGTGACAATGTACCAGCTGAAATACTTGACATAGAGCAATTTGATGAACCTGTTCAAAAGCGCACAATAGACTTAATTTATGGTCTTGGAATTACCAAATTGGTCATGGCATTCTCATTCATGAAGGCTTCATTGAAACAAAAAGATGCGATGAACGCAATGTTGTATGTTCATAAGCAGAAGCCTGGGTTCTGTGAACTGTTCTTTGTGTGTGAAGGGATACAAGTGTTCCTCCGAGAGAAGGATAATGATGAGACAGTAATGGAGGATGATAATGGTGTCACAGTTGCAAGAATGAAAGATAACAACAATAAGTCAGTTGCCAAATGGTGCCTAGAAAGACTAATATTCAGTAACAGTAGAAGCATTGATTCCGATCCTACAAGTTCTTCTTCATCCTCCGTGTTCCCTCTTATTAACCAAAACCTCTGGGAATTTTATCTCCGAGAGATTGAAAATTATTATCAGGAATTGCTGTCTTTGAATTTGGAGGAAGAAAACCACAACTCAGATTTTCCACCTTCTCAATATGAGAGCCTCAGAGAGGAACTGAATGAAGCATACAATAGGATCCAGACAAAGAGAAAGGAAGCCAAGCAGAATATAGAAAGACATGAAAAGGCTGAATGGGCTATTTGGTTCTGCAACCGTCGGGAAGAAGAGCTTGAGAATCGAATCAAGGAAGAGGTTGCTGCAAGGGAAGAACTAAAGAAGGAACTGGAGAGAAAAAAGGAAGAAGTAGATGAAATAAGTGTTGAAGTTGAAGAGACTAAGAAAATGGTAATACAAGTGTCAGAAACCGAAAGACAACAAAGAAAGGTAATAGAAGTGAAAACACAGATTCTTGGGGAGATTGAAGAGTTGAGGAAACAAAGAATAATGGGGAGATCAAGGAGGGTGGTGGCAGAGGCAGTGAATAATAATGGTTGTTGTGTTTTCAGGGAGTACAGAGAGGAGGAGATCGTGGTGGCCACACACAGCTTTTGGGATGAGTTGAGGATGAAAGGTAGCGTTGGAGGATGGAGTAATGTGTATAAAGGAAGGATCAATGGTTATACAGTTGCAATCAAGATGCTCAATTCTCTTCCTGCATTCTCCCAACTACATTATTTCTTAGCTAAGGTGAAGATTCTTGGCAGTATTCGGCACCCACATCTAGTTGATATGCTAGGCTTCTGCTCCGAGCCCAAATGCATAATTCTAGAATACATGGACAGTGGGAGCTTGGGAGACATTCTACATTGCAGGGTAAGAAAATGGTCCTTATGGTGGCATGATCGGATAAGGATCGCGATCGAAGTTTGCTCGGGCCTGGGCTTTCTCCATGAATCTCAGCCCAGGCCCATTATTCATTGTCGCATTGACCCATCCAATATCCTCCTAGACCACAACCTTGTTGCAAAGATCACAGGCTTTGGGCTTCATGGATGTGGTGAAGAATGCAATGTTGGGTCTGATGTAAAGGCGGTAGGGGTTTTGTTGATGCAACTTTTGACCGGAAAAAGAAATTTTCTGGGTATGGTTAGGGAGGATATTTTGGATGGAAGTGGTGGGAAATGGCCATTGGATGTAGCAAAGGAAGTTGAGGACTTAGCAAAGAGGAGCATGTCCAATGAAGACATGAGCATTGCAAGGGTCATGGAGGAACTCAATGAGATTAGAAGAAAGCATGATAGTATAGCTTGGACAAGAATTGATTAG 1974 0.4159 MNGRAEREKIYVALGNNVLEGIHTLAWTLSKWHSHPISIIILHVKYNNTCNHLSTLLGNFPEGIACDVKMERIRKGEEDKIDKMLSKYISFCDNVPAEILDIEQFDEPVQKRTIDLIYGLGITKLVMAFSFMKASLKQKDAMNAMLYVHKQKPGFCELFFVCEGIQVFLREKDNDETVMEDDNGVTVARMKDNNNKSVAKWCLERLIFSNSRSIDSDPTSSSSSSVFPLINQNLWEFYLREIENYYQELLSLNLEEENHNSDFPPSQYESLREELNEAYNRIQTKRKEAKQNIERHEKAEWAIWFCNRREEELENRIKEEVAAREELKKELERKKEEVDEISVEVEETKKMVIQVSETERQQRKVIEVKTQILGEIEELRKQRIMGRSRRVVAEAVNNNGCCVFREYREEEIVVATHSFWDELRMKGSVGGWSNVYKGRINGYTVAIKMLNSLPAFSQLHYFLAKVKILGSIRHPHLVDMLGFCSEPKCIILEYMDSGSLGDILHCRVRKWSLWWHDRIRIAIEVCSGLGFLHESQPRPIIHCRIDPSNILLDHNLVAKITGFGLHGCGEECNVGSDVKAVGVLLMQLLTGKRNFLGMVREDILDGSGGKWPLDVAKEVEDLAKRSMSNEDMSIARVMEELNEIRRKHDSIAWTRID* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4592 657 Coils Coil 268 299 - -
Amo13g4592 657 PANTHER U-BOX KINASE FAMILY PROTEIN 5 652 - -
Amo13g4592 657 SUPERFAMILY Protein kinase-like (PK-like) 429 603 IPR011009 -
Amo13g4592 657 PANTHER OS02G0152300 PROTEIN 5 652 - -
Amo13g4592 657 Pfam Protein tyrosine and serine/threonine kinase 430 566 IPR001245 GO:0004672|GO:0006468
Amo13g4592 657 Gene3D Phosphorylase Kinase; domain 1 419 496 - -
Amo13g4592 657 Gene3D Transferase(Phosphotransferase) domain 1 506 647 - -
Amo13g4592 657 ProSiteProfiles Protein kinase domain profile. 421 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4592 657 Coils Coil 310 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4592 Amo-Chr13 143130766 143133676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4592 8 649 U-box Gene Family AT5G65500 39.276 1.66e-135 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Amo13g4592 PK_Tyr_Ser-Thr 9.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4592 - - adu:107481154 1214.91