Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4591 ATGCACTCTCACTCCCTCCTTTCAATGGAAACGCTCACCACCTCCTCCTCCATCTACCATCAATCTCTGCCTCCTACTCCTCCTCCTCATTACTACTTCCTCTACGCCAACGGTACCACTGACCTCAAGCCTGAGGGACTCGACGGTACTTCCCAACTGGATCATAACATCATGTCCCAACAACCTTCTTTCTTCATCAACCCAAACCTTCAGCCACCACAACCCCTCCTGCCAAAGCTCGAATATTTCTTTCAAACCGACAGAAATGATGATGATGATTCCTCTTCCCTCACCCAAGATCTGAAAGCGCTTGCTGCTGACGCTGCCTTCCTAGCTTTCTCCTCTGCCAATTCGGTCTCTCAGGTGCTGGATGCTCACTCATCCCGGAACGATGACTTCGCGTTCTCCGCTAGTAAAGGCGGTAACTCCTCCAACTCCAAGAAGGTTGTTGGTGATACATTTGGCCAGCGAACTTCAATATACAGAGACACCGATGGACGGGACGATATGAAGCTCACCTGTGGGATAATAGCTGCCGCCGAGAGGGTCAAGCCAGGAAAGGCCGTCAAGGTTTCTAATTATATAAAGGAATTGGAAGAGATGAAAGATGTGGGGAAGCTTGAATTTATTGCATCACTACGAAGGAGAAGTAGTGGTTTCTCCAGGGGAGCTTCCATATACAGGGGTGTTACAAGCAGGCATCATCAACAAGGTAGATGGCAAGCGAGAATAGGCCGCGTTGCAGGGAACAAAGATCTATACCTAGGGACATTTGCAAGTGAAGAGGAAGCCGCGGAGGCATACGATATTGCGGCAATAAAGTTCAGAGGGTTAAATGCAGTAACCAATTTTGAGACGAGTAGGTACAATGTGGAAGCCATAATGAATAATTCTCTTCCCGTTGGCGGGGTAGCCAAACGGTTGAGGCTTTCCCTAGAATCAGAGAAGGAAGAAGCTGCTAGTACTCATACTCATCAGCCACCTAAGACTGAGAGTGAGAGTAGCATCATGACATTGTCAACCATTCCGGCTCCTCCTGCACAGTTTGATTCTGTGACACCATATTGCTACCAATTTCATTCCCCCGATGCCGTTAACGATGCTATCATGCCAATGTAA 1119 0.4817 MHSHSLLSMETLTTSSSIYHQSLPPTPPPHYYFLYANGTTDLKPEGLDGTSQLDHNIMSQQPSFFINPNLQPPQPLLPKLEYFFQTDRNDDDDSSSLTQDLKALAADAAFLAFSSANSVSQVLDAHSSRNDDFAFSASKGGNSSNSKKVVGDTFGQRTSIYRDTDGRDDMKLTCGIIAAAERVKPGKAVKVSNYIKELEEMKDVGKLEFIASLRRRSSGFSRGASIYRGVTSRHHQQGRWQARIGRVAGNKDLYLGTFASEEEAAEAYDIAAIKFRGLNAVTNFETSRYNVEAIMNNSLPVGGVAKRLRLSLESEKEEAASTHTHQPPKTESESSIMTLSTIPAPPAQFDSVTPYCYQFHSPDAVNDAIMPM* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4591 372 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 191 340 - -
Amo13g4591 372 CDD AP2 225 287 IPR001471 GO:0003700|GO:0006355
Amo13g4591 372 Pfam AP2 domain 227 277 IPR001471 GO:0003700|GO:0006355
Amo13g4591 372 PRINTS Ethylene responsive element binding protein signature 267 287 IPR001471 GO:0003700|GO:0006355
Amo13g4591 372 PRINTS Ethylene responsive element binding protein signature 227 238 IPR001471 GO:0003700|GO:0006355
Amo13g4591 372 SMART rav1_2 226 291 IPR001471 GO:0003700|GO:0006355
Amo13g4591 372 Gene3D AP2/ERF domain 226 287 IPR036955 GO:0003700|GO:0006355
Amo13g4591 372 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 191 340 - -
Amo13g4591 372 MobiDBLite consensus disorder prediction 314 336 - -
Amo13g4591 372 SUPERFAMILY DNA-binding domain 225 286 IPR016177 GO:0003677
Amo13g4591 372 ProSiteProfiles AP2/ERF domain profile. 226 285 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4591 Amo-Chr13 143111179 143114430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4591 100 304 AP2-EREBP Transcription Factor Family AT5G57390 48.963 1.16e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Amo13g4591 AP2 1.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4591 K09285 - dcr:108202466 219.55