Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4582 ATGTTATATCCTGCAACACAAGAAGTTGTATCTCAAGTTCCTTTGACCACATATGAAGAGTTTAAAGCAGCAGTTGTTGCAGCCAAGCAAGCATTTCCTTCATGGAAAAACACTCCTATTACCACTCGTCAACGAATAATATTCTTATTTCAGGATAAGCTTGCCATGAACATCACCATAGAACAAGGAAAAACATTAAAGGGTGCCAGAGGAGATGTGCTTCATGGTTTAGAGATGGTAGAGCATGCTTGTGGGATGGCAAATCTGCAAAAGGGAGAAATTGTTCCTAAAGCTTGTAATGGAATTGATACATACTGCATCAGAGATCCCCTTGGAGTTTGTGCTGGAATATGCCCGATTAACTTTCCTGCAATGACACCCTTGTGGATGTTCCCTATCGCGATAACATGCGGCAACACTTTTATTCTTAAGCCATGTGAAAATAATCCAGGAGCTTCAATGATACTTGCAGCATTAGCAATGGAAGCTGGTTTGCCCGATGGTGTTTTAAACGTGTATGAGATTGTTAATTACATATGCGATGATGAGGATATAAAAGCTGTGTCATTCAATGGTTCAATTACAGTAAGTGGCATAAATCATGTAGTTGTTATGCCAGATGCTAGCATGGATGCTACTTTAGATGCCCTTGTTTCTGCTGGTTTCCGTGCAGCAGGAGAGAGGTCCATGGCTTTAAACACAGCTATCTTTGTGGGAGGTTCAATGCAATGGGAAGATGAATTGGTGCAGCGTGCCAAAGCACTTAGAGTGAATGTAGGAACAGATCCTGATGCATACCTAGGTCCAGTTATTAGCAGAGAGGTAAAAGATAGGATATGTGGACTAGTTCAGAATGCTGTTGAAAATGGTGCAAGACTCCTACTTGATGGGAGGCACATTATGGTGCCTGGATATGAGAATGGAAATTTTGTTGGCCCTACTATCTTATGTGATGTCACAACCAACATGGAGTGTTACAAGGAAGAAATTTTTGGACCAGTTCTTCTTTGCATGCAGGCCGACAACCTAGATGAAGCTGTATCAATAATAAATAAAAACAGGAAGTTCCAACATGAGGTTGAAGCTGTACTGGTTGGGATCAACGTGCCTGTACCTATTCCGTTACCATTTTCCTCTAATTATGAGTCAAAAGCATCTTTTGCCGGCAATTTCAATTTTTGTGGAAGAACAGGAGTACAATTTTGTACCCAAATAAAAAAAGTGGCAAAAAGATGGAAGAGTAATTCACCAACCTATGAAGTGCAACTAGCTATTGCTGATGCAGATATACAGAACACAGCTATCTCATCTGCGACAGCACCGGCTGATAAGGATATCAGAAGCCAACATGTTTCTCTGGTATTATCGCCCTCGTCACAGGCATCAGAGAGGATTGGTGTTTCTAAACCATCTCAGTGGAATGAGAATTTGCCTGCAACATCTCAGAAAAGTGAGACTATTCCCCAAACTTCCGAGCAGAGTCATGTCACTTCATCTGAGATGAATGTAAACTTATATACAGCATCCCAAGAGGCTGACACCGCTACTGTCCCAGCTCTGAAATCAGATGAAATATACATGTCTATGACCCATGAAGTTGATGACTTAGCTCAAATATCACCTAGAATAGATGCTGATGTGAGTAAAAGCATTGGTGAAACATTTGAAAAAAGTGACACCATGTTAACTTCTGAGAGAATATACATGCCTGTAACAACATCTCACACGACTGATATAGGCTTAAGTCCAACTTCAGAAAAGAAATAA 1767 0.4069 MLYPATQEVVSQVPLTTYEEFKAAVVAAKQAFPSWKNTPITTRQRIIFLFQDKLAMNITIEQGKTLKGARGDVLHGLEMVEHACGMANLQKGEIVPKACNGIDTYCIRDPLGVCAGICPINFPAMTPLWMFPIAITCGNTFILKPCENNPGASMILAALAMEAGLPDGVLNVYEIVNYICDDEDIKAVSFNGSITVSGINHVVVMPDASMDATLDALVSAGFRAAGERSMALNTAIFVGGSMQWEDELVQRAKALRVNVGTDPDAYLGPVISREVKDRICGLVQNAVENGARLLLDGRHIMVPGYENGNFVGPTILCDVTTNMECYKEEIFGPVLLCMQADNLDEAVSIINKNRKFQHEVEAVLVGINVPVPIPLPFSSNYESKASFAGNFNFCGRTGVQFCTQIKKVAKRWKSNSPTYEVQLAIADADIQNTAISSATAPADKDIRSQHVSLVLSPSSQASERIGVSKPSQWNENLPATSQKSETIPQTSEQSHVTSSEMNVNLYTASQEADTATVPALKSDEIYMSMTHEVDDLAQISPRIDADVSKSIGETFEKSDTMLTSERIYMPVTTSHTTDIGLSPTSEKK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4582 588 SUPERFAMILY ALDH-like 3 413 IPR016161 GO:0016491
Amo13g4582 588 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 3 412 IPR010061 GO:0004491
Amo13g4582 588 MobiDBLite consensus disorder prediction 464 497 - -
Amo13g4582 588 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 199 IPR016162 GO:0016491
Amo13g4582 588 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 200 377 IPR016163 GO:0016620
Amo13g4582 588 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 2 532 - -
Amo13g4582 588 Pfam Aldehyde dehydrogenase family 3 353 IPR015590 GO:0016491
Amo13g4582 588 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 2 532 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4582 Amo-Chr13 142993707 143009064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4582 1 408 Aldehyde Dehydrogenase Gene Family AT2G14170 61.894 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4582 K00140 - gmx:100796803 731.48