Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4577 ATGGTAGGCAGCTACATACTGTGCCTGCTACTGCATCAACATTCAGATATCTTCACTGCCAAGCCTCAACCGATAATGCTATTACCGAGCAGAAACAGATCAGACTATGTGCATAGTCAAAGTAGAAAAATCAAACCCCACCAATACATATATATAACATGCTCTACTCTGTTGTACGTACTAACTAATTCAATATATTACGTGTTATTAGAAATGTCCCAAGAAGGTTTAACAGAAGAAAAGGAAGCAATGCGTGCCTATGGATGGGCTGCAAGAGATTCATCGGGAATTCTCTCCCCTTTACATTTCACCAGACGGGCAAATGGTGATACAGATATCACCATCAAGATACTCTACTGCGGGATTTGCCACTCCGATTTTCATATGCTGAAGAATGATCATGCCATAAGCATCTATCCCTTAGTCCCCGGGCATGAGATTGTGGGGCAAGTGACACAGGTGGGAAGACAAGTTACAAAATTTAAGGTTGGTGATGTGGCTGGTGTGGGTGGCATTGTGGGCACGTGCGGCACGTGTTCCAACTGCACACAGGGCTTGGAAACTTACTGCCCCAAAATGATTCTAACCTCTAGCTCACACTACCATGATGGATCAATAACWTATGGAGGCTTCTCTGATAATTTTGTTGTTGATGAGCACTTTGCCGTCACAATTCCCGAATCTATGCCTCTGCATGCCACAGCCCCTTTGTTGTGTGCTGGAATCACTGTTTACARCCCCATGTTGCACCACGGGCTCTGCAGGCCCGGTCAGCACTTGGGTGTGGTGGGCCTTGGTGGGCTCGGCCATCTGGCTGTTAAGTTTGCCAAGGCTTTTGGTATGAAGGTCACTGTTATAAGCACTTCTTCCCGGAAGAAGGAGGAAGCAATTGAACGTCTTGGTGTGGATGCCTTCTTGCTTAGTCATCAGCAACAACAATTGCAGGATGCRACCGGGACAATGGATGGGATCATTGACACAGTTTCAGCACCTCATTCTGTGTAYCCTTTAGTTGGTTTATTGAAGACAGGAGGCAATTTGATATTGGTGGGTGCACCTGCAGCCTCATCTCCTGAATTACCGTCTCTGCCACTCATTATGGGGAGGAAGTCAATAAGTGGGAGTGCAGGTGGAGGAATGAGAGAGACACAAGAGATGATTGAATTTGCGGCAAAGCACAATATTAGTGCAGATGTGGAAGTTATTCCCATGGATTATGTGAMCACTGCTATGGGTAGACTTGTCAACAATGATGTTCAATATCGATTCGTCATTGATGTAGCAAATACTTTGGACACTCCACGCACTAACTAA 1314 0.4536 MVGSYILCLLLHQHSDIFTAKPQPIMLLPSRNRSDYVHSQSRKIKPHQYIYITCSTLLYVLTNSIYYVLLEMSQEGLTEEKEAMRAYGWAARDSSGILSPLHFTRRANGDTDITIKILYCGICHSDFHMLKNDHAISIYPLVPGHEIVGQVTQVGRQVTKFKVGDVAGVGGIVGTCGTCSNCTQGLETYCPKMILTSSSHYHDGSITYGGFSDNFVVDEHFAVTIPESMPLHATAPLLCAGITVYXPMLHHGLCRPGQHLGVVGLGGLGHLAVKFAKAFGMKVTVISTSSRKKEEAIERLGVDAFLLSHQQQQLQDATGTMDGIIDTVSAPHSVYPLVGLLKTGGNLILVGAPAASSPELPSLPLIMGRKSISGSAGGGMRETQEMIEFAAKHNISADVEVIPMDYVXTAMGRLVNNDVQYRFVIDVANTLDTPRTN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4577 437 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 144 158 IPR002328 GO:0008270|GO:0016491
Amo13g4577 437 Gene3D - 240 397 - -
Amo13g4577 437 Gene3D - 89 427 - -
Amo13g4577 437 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 229 395 IPR036291 -
Amo13g4577 437 SUPERFAMILY GroES-like 94 258 IPR011032 -
Amo13g4577 437 CDD CAD1 88 426 - -
Amo13g4577 437 Pfam Zinc-binding dehydrogenase 267 391 IPR013149 -
Amo13g4577 437 PANTHER ALDEHYDE REDUCTASE 75 432 - -
Amo13g4577 437 SMART PKS_ER_names_mod 96 425 IPR020843 GO:0016491
Amo13g4577 437 Pfam Alcohol dehydrogenase GroES-like domain 111 224 IPR013154 -
Amo13g4577 437 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 75 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4577 Amo-Chr13 142895714 142897697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4577 85 437 Monolignol Biosynthesis Gene Families AT4G37990 62.323 5.24e-147 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4577 - K23232 aip:107621738 689.878