Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4576 ATGGGCTTTCTGAGCCGGGCCTGCACGTGGGCGTGGTTGGACTTGGAGCCTTGGTCACGTGGCTGTGAGTTTGCTAAGGCCTTTAATATGAAGGTCACGGTAATAAGCACTTCTCCTAGCAAGAAGAAGGAAGCATTGGAGAAGCTTGGTGCCGATGCATTCTTGATCAGATGCTATGTGTACAATGACGGTATTATCGACACAGTTTCTGGTAATCACTCGGTTGAACCATCGCTTGGTTTATTGAAAACAAGTGGAAAACTCATATTTGTGGGAGCACCTCCCTTGCCTCTTGAGATGTCAGCCCAAACTTTGCTTATGGGGAGGAAGATGGTTGGTGGGAGTAATATAGGAGGTATTGAAGAGATGCAAGAGATGGTGGATTTTGCAGCAAATCATAATGTGACTGCGGAGGTTGAGGTTATAGCAATGGAGTACGTGAACTGCGTTAGAGAGGCTCCCAAATAA 468 0.4658 MGFLSRACTWAWLDLEPWSRGCEFAKAFNMKVTVISTSPSKKKEALEKLGADAFLIRCYVYNDGIIDTVSGNHSVEPSLGLLKTSGKLIFVGAPPLPLEMSAQTLLMGRKMVGGSNIGGIEEMQEMVDFAANHNVTAEVEVIAMEYVNCVREAPK* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4576 155 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 135 IPR036291 -
Amo13g4576 155 Pfam Zinc-binding dehydrogenase 22 131 IPR013149 -
Amo13g4576 155 Gene3D - 21 137 - -
Amo13g4576 155 Gene3D - 138 150 - -
Amo13g4576 155 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 23 151 - -
Amo13g4576 155 PANTHER ALDEHYDE REDUCTASE 23 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4576 Amo-Chr13 142879875 142880545 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4576 23 152 Monolignol Biosynthesis Gene Families AT4G37990 54.348 4.18e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4576 - K00095 gmx:100801089 163.696