Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4573 ATGGCCTTGTTTTCTATGTTTATGATCTTCACTTGGTTGATTTTTCTCTATAACACCAAAACTGTAGAGTCTGTTTCATTCAACTTGGATAATTTCATGCCAAATCTATACCTAATTAAATTCGAGGGCGATGCATTTGTGTCGGAAAAAGTTTTACAGCTGACAAAGAACAGAATCGACGGCCCTATTACAAAAAGCGTGGGCCGCGCCTCGTTTGATCAACCGGTGAAGCTTTGGGATAAAGGAACAAGACAGCTCACTGATTTCACCACACATTTCTCTTTTATTATGAAAGCTATCAATCCCAACATGTTCGGTGATGGATTATCATTCTACATTGCACCTTTTGAATCAACCATCCCAAACAATTCAGTTGGAGGRTTCCTTGGWCTCTTCAGCGGGGAATCTGCATTCAACACCACTGCCAATCAAATAGTCGCTGTCGAGTTTGACAGCTTTGAGAATCCATGGGATCCAAACCCTAATCATGTTGGGATCAATGTTAATTCTATAATATCTGTTGCAAACGTGAGTTGGAATAGGAACATGAAGAATGGATCCRTTGCTAATGCTTGGGTTTCATACAACTCCACCACCAAGAATCTCTCCGTGTTCCTTACTTATGCAGATAATCCAACATTCAACGGCAWTTTTAGTCTCTCACATGTCATTGATCTCAGGGAATTCTTGCCGGAATTTGTTAGGATTGGATTCTCCGCCGCCACCGGTGATTGGATCGAAATACACAACGTTYTGTCTTGGTCATTCAATTCAACCTTGGACTCKAGCACGGGGAAAAGCAAGGTTGGTTTGGCMAGTGGTTTGAGTGTTGGATTCGGTACTCTAGCATGTTTAATAGGTGTTATTTGTTTTGTATTTTGGAGGAAGARAAGAAACCGAGCCARGAAAGACGAWGACGATACGGGWTTCGATGCTTCTATAGAAGATGAATTCGAAAGAGGAACWGGTCCGAAGCGGTTCACTCAGAAGGAGCTAAGCCAAGCGACGAACGGGTTCGCGGAAGAAGGAAAGCTGGGAGAAGGAGGATTTGGAGGTGTGTACAAAGGAGCAGTAGGGAATCCAAGAATGGAAGTTGCGGTGAAGAGAGTATCGAAAGGATCAAAACAGGGGAAAAAGGAGTACATATCAGAAGTAAGAGTAATAAGCAGGCTGAGGCACAGGAATTTGGTTCAACTCATAGGCTGGTGCCATGAGAAAGGTGAGTTTCTTCTTGTTTATGAGTACATGCCTAATGGTAGCCTTGACTCTCATTTGTTTGGAAAAGGAGTCATGCTTKCTTGGGCTGTAAGGTACAAGATTGCATTGGGTTTGGCATCTGCACTTGTTTATCTTCATGAAGAATGGGAACAATGTGTGGTGCATAGGGATATTAAGTCAAGTAATGTCATGTTAGATGCCAATTTCAATGCCAAACTCGGCGATTTCGGTCTAGCAAGGTTGGTGGACCATGAACTGGGGACTCAAACCACGGTTTTGGCCGGCACCATGGGRTACCTAGCCCCGGAGTGTGTCACCACTGGGAAATCAAGTAAGGAATCTGATGTGTATAGCTTTGGCGCCGTGGCGCTCGAGATAGCGTGCGGGCGAAGGCCGGTTCAAGTTAAAGAAGAGCCCGGCAAAGTGAGGCTWATAGAATGGGTGTGGAACTTGTATGGACAGGGGAAGCTTCTAGAAGCCGCTGATTGGAGGTTAGATTTGGAATTTGATGTGAAGCAAATGGAGTGCTTGATGACCGTTGGATTGTGGTGTTGTCACCCTGATTATRCTATGAGGCCTTCTATAAAGCAAGTWATAAATGTGCTTAATTTTGAAGCTCCTTTGCCASCACTTCCATCACAGTTACCTGTGCCTATGTACTTCGCACCTCCCATGGAWATGTGCAAATTCACCTACACTTCTTCTGGAACCACAGCCACATCTAAAGACTCCTCAAACTACTCATCCATGTCAGCAGGGTCCAGAAAATCTCTATTATAG 1998 0.4364 MALFSMFMIFTWLIFLYNTKTVESVSFNLDNFMPNLYLIKFEGDAFVSEKVLQLTKNRIDGPITKSVGRASFDQPVKLWDKGTRQLTDFTTHFSFIMKAINPNMFGDGLSFYIAPFESTIPNNSVGGFLGLFSGESAFNTTANQIVAVEFDSFENPWDPNPNHVGINVNSIISVANVSWNRNMKNGSXANAWVSYNSTTKNLSVFLTYADNPTFNGXFSLSHVIDLREFLPEFVRIGFSAATGDWIEIHNVLSWSFNSTLDSSTGKSKVGLASGLSVGFGTLACLIGVICFVFWRKXRNRAXKDXDDTGFDASIEDEFERGTGPKRFTQKELSQATNGFAEEGKLGEGGFGGVYKGAVGNPRMEVAVKRVSKGSKQGKKEYISEVRVISRLRHRNLVQLIGWCHEKGEFLLVYEYMPNGSLDSHLFGKGVMLXWAVRYKIALGLASALVYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGTQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGAVALEIACGRRPVQVKEEPGKVRLIEWVWNLYGQGKLLEAADWRLDLEFDVKQMECLMTVGLWCCHPDYXMRPSIKQVINVLNFEAPLPXLPSQLPVPMYFAPPMXMCKFTYTSSGTTATSKDSSNYSSMSAGSRKSLL* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4573 665 ProSiteProfiles Protein kinase domain profile. 339 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4573 665 CDD lectin_legume_LecRK_Arcelin_ConA 25 260 IPR001220 GO:0030246
Amo13g4573 665 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Amo13g4573 665 CDD STKc_IRAK 353 609 - -
Amo13g4573 665 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Amo13g4573 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 261 IPR013320 -
Amo13g4573 665 Pfam Protein kinase domain 340 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4573 665 PANTHER - 19 640 - -
Amo13g4573 665 SUPERFAMILY Protein kinase-like (PK-like) 323 633 IPR011009 -
Amo13g4573 665 SMART serkin_6 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4573 665 Gene3D Transferase(Phosphotransferase) domain 1 416 628 - -
Amo13g4573 665 Gene3D - 22 273 - -
Amo13g4573 665 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Amo13g4573 665 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Amo13g4573 665 PANTHER RECEPTOR LECTIN KINASE 19 640 - -
Amo13g4573 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Amo13g4573 665 Pfam Legume lectin domain 25 263 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4573 Amo-Chr13 142826628 142828763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4573 8 626 Receptor kinase-like Gene Family AT5G10530 50.709 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g4573 Pkinase 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4573 - - gmx:100791518 977.622