Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4531 ATGGAGCATCCAAGAAAGGCTTTTGGTTGGGCAGCTAGGGACGCATCTGGCATTCTCTCCCCCTTCAACTTCTCAAGAAGGGAAACTGGAGACAAAGATGTTACTTTCAAAGTGCTCTACTGTGGGATATGCCACTCAGATCTCCACATGCTCAAGAACGAATGGGGCAACTCCACTTACCCCTTAGTACCTGGGCATGAGATTGTGGGGATAGTAACAGAGGTGGGAAGTAAGGTAGAAAAGTTCAAGGTTGGAGACAAGGTGGGAGTTGGGTGCATGGTCCAATCCTGCCGCAACTGCCAAAACTGCGCTCACGATCTTGAAAACTACTGTCCACAAATGGTCCTCACGTACGGCGCCAAGAACGTTGATGACACCATCACCTATGGAGGTTACTCAGATTTCATGGTTGCCGATGAACACTTTGTGATCCGAATTCCGGATGCCATGCCTCTTGATGGCGCCGCTCCTCTCCTCTGTGCCGGCATCACTGTGTACAGCCCCATGATATATTTTGGGCTCAACAAGCCCGGTCTGCATTTGGGCGTGGTTGGGCTGGGCGGGTTAGGCCATATGGCTGTGAAGTTCGCTAAAGCCTTTGGGATGGAGGTGAGTGTGATTAGCTCTTCTCCCGGTAAGAAAAATGAAGCCATTGAACATCTTGGAGCCGATTCGTTTGTGCTTAGCACTGACCAACATCAGATGAAGGCTGCAATGGGCACCTTGGATGGTATTATTGACACAGTTTCTGCGGTTCACCCTTTGGTTCCTTTGATTGGTCTGTTGAAGTCTCATGGGAAGATTATCATGGTTGGTGCACCAGAGAAGCCTCTAGAGCTACCCGTCTTTCCTTTAATTATGGGGAGAAAGTTAGTAGCTGGGAGTTGCATTGGAGGGATTAAAGAGACACAAGAGATGATTGATTTTGCTGCCAAACATGGTGTTAAACCTCACATTGAGGTTATCCCTATCGATTATGTGAACACAGCAATGGAGCGTCTCCTCAAAGCGGATGTGAAGTATAGATTTGTCATTGACATTGGAAACACATTGAAGCCAAGTTCTTAA 1068 0.4785 MEHPRKAFGWAARDASGILSPFNFSRRETGDKDVTFKVLYCGICHSDLHMLKNEWGNSTYPLVPGHEIVGIVTEVGSKVEKFKVGDKVGVGCMVQSCRNCQNCAHDLENYCPQMVLTYGAKNVDDTITYGGYSDFMVADEHFVIRIPDAMPLDGAAPLLCAGITVYSPMIYFGLNKPGLHLGVVGLGGLGHMAVKFAKAFGMEVSVISSSPGKKNEAIEHLGADSFVLSTDQHQMKAAMGTLDGIIDTVSAVHPLVPLIGLLKSHGKIIMVGAPEKPLELPVFPLIMGRKLVAGSCIGGIKETQEMIDFAAKHGVKPHIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4531 355 SUPERFAMILY GroES-like 2 193 IPR011032 -
Amo13g4531 355 Gene3D - 10 347 - -
Amo13g4531 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 65 79 IPR002328 GO:0008270|GO:0016491
Amo13g4531 355 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 354 - -
Amo13g4531 355 Pfam Alcohol dehydrogenase GroES-like domain 32 145 IPR013154 -
Amo13g4531 355 PANTHER ALDEHYDE REDUCTASE 1 354 - -
Amo13g4531 355 CDD CAD1 8 346 - -
Amo13g4531 355 SMART PKS_ER_names_mod 17 345 IPR020843 GO:0016491
Amo13g4531 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 316 IPR036291 -
Amo13g4531 355 Pfam Zinc-binding dehydrogenase 188 311 IPR013149 -
Amo13g4531 355 Gene3D - 161 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4531 Amo-Chr13 142069598 142071540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4531 5 354 Monolignol Biosynthesis Gene Families AT4G37990 71.429 7.26e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4531 - K23232 mnt:21385910 606.675