Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4523 ATGTCAAAGACAAATAATGTTCTGTTGGGATTCCCGACAAGTCCTTTTTGCGCGAGAGTGAAGCTTGCCTTGGCGGAGAAAGGTGTGGATTATGAGGAAAGGGAGGAGGATTTGTTTGGGGGAAAGAGTGAGCTTCTCCTGAAATCCAATCCAATTCATCAGAAGGTTCCAGTGTTCTTGCATGATGGCAAGCCTTTGCTAGAGTCTTCCATCATTGTCAGCTACCTTGATGAGGTTTTTACTTCCAATCCACTACTTCCAACTTGTGCATATGAACGTGCCCAAGCAAGATTCTGGACTGACTTCATTGACAAAAAGGTGTTTGAGAGCATGAAGGGTATCTGGCTAAGCAAGGGAGGAGAAGAACAAGAAGTTGCGAAGAAGGATTTCATTGAGATCCTAAAGCAACTAGAGGAAGCTCTTGGGGAGAAGGACTTCTTTGGTGGTGATTCCTTTGGGTATGTTGATGTGATTGCAATCCCTCTCACAACATGGTTCTTGGCATGTGAAAAATTTGGTGCCTTCAAAGTTGAAGACCACTGCCCCAAGATTACAGCATGGATTAAGAGGTGCTTTCAGAAGCCAACTGTGGTCAAATCACTCCCACACCCAGAAAATGTCTACCAGTTTACTACACAGTTGAGGCAGATGCATGGCCTTTGA 663 0.4465 MSKTNNVLLGFPTSPFCARVKLALAEKGVDYEEREEDLFGGKSELLLKSNPIHQKVPVFLHDGKPLLESSIIVSYLDEVFTSNPLLPTCAYERAQARFWTDFIDKKVFESMKGIWLSKGGEEQEVAKKDFIEILKQLEEALGEKDFFGGDSFGYVDVIAIPLTTWFLACEKFGAFKVEDHCPKITAWIKRCFQKPTVVKSLPHPENVYQFTTQLRQMHGL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4523 220 SFLD Main.3: Omega- and Tau-like 4 217 IPR045073 -
Amo13g4523 220 SFLD Main (cytGST) 4 217 - -
Amo13g4523 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 213 IPR045073 -
Amo13g4523 220 SUPERFAMILY Thioredoxin-like 7 107 IPR036249 -
Amo13g4523 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 7 213 - -
Amo13g4523 220 Pfam Glutathione S-transferase, C-terminal domain 121 195 IPR004046 -
Amo13g4523 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 84 IPR004045 -
Amo13g4523 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 210 IPR010987 -
Amo13g4523 220 Gene3D - 89 220 - -
Amo13g4523 220 SUPERFAMILY GST C-terminal domain-like 78 218 IPR036282 -
Amo13g4523 220 Gene3D Glutaredoxin 1 88 - -
Amo13g4523 220 ProSiteProfiles Glutaredoxin domain profile. 1 93 - -
Amo13g4523 220 CDD GST_N_Tau 7 80 - -
Amo13g4523 220 Pfam Glutathione S-transferase, N-terminal domain 8 78 IPR004045 -
Amo13g4523 220 CDD GST_C_Tau 90 214 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4523 Amo-Chr13 141940252 141942058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4523 7 216 Glutathione S-transferase Gene Family AT1G78380 55.450 9.20e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4523 K00799 - pvy:116134903 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4523 13 141940252 141942058 Amo13g4523 13 141940252 141942058 ECH