Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4510 ATGCCCTTGGAAGGGGTTTTCATTCAACCACCCTCTACTTCTGCTACTTCTGCTTCTGCTTCTACTTCTTGTGTTCCTGATCTTTCCCTTCACATAAGCCCTCCAACCACCACCAGCTATGCCGGAGGACATCACACCGACCTCTCTCTTGGAAGACGAGAACCACCGCCACCGCCACCATCACTGCCAACTAACATGAACCACATAAACGAAGCCTTGAGACCCATCAAAGGGATCCCCGTTTATCACAACCGTTCTTTCCCTTTCTTACCCATGGATAGGGATCACAATAATCCAAATCCCAAGATGTGCTTATATCATCACATGCCTGCATCTTCTTCTCCTTTCCCAGTGGGAGTGGGTTTAGATCCCATTTCCTTCTTGAATTCCGGGGGAGCAGGAGGGCCTTATAATAATAGGGTTGCGGCGGTGGCTGCTGCCACAAGTAGGTTCAATAATGGGATCCCAAGCCATCAGCATCATCCATTGCACCACCACTACGGGTCAAGGTTCTTGTCTAAGCTGCCAAGCAAGAGGAGCATGAGAGCACCCAGGATGCGGTGGACTAGCACCCTCCATGCTCGATTTGTTCACGCCGTTGAGCTTCTTGGTGGCCATGAAAGAGCAACACCCAAGTCCGTACTTGAGTTGATGGATGTCAAAGATCTCACATTAGCCCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACTACTGACAAGCCTGCAGCTTCTTCGGGGCTTTCGGATGGATCAGGAGAGGATGAAATGTCTCCTCCAATGGGAAGCAGTGGTATGCGTCAATTTCAAGAGCAAAGAGGCCAACAAGATATGGATTATTCTTCCACCCCAACACTATGGAGTAATAATTCTTCAAGCAATAGGGACCCATGGCCACAAGCTAATTCAAACGACATAGATGGTTTCAGACCAATATCAATGTTTCAGTCTCAATCCATAGGCCATCAAATCCAGCAGGCGTGTGATTCAACCCAAATCAAGAGCAGTTTGTCAGGATCTAATAATAATTTAGAGTGCAAGAATCCAAGTTTGGAGTTCACATTAGGCAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1107 0.4734 MPLEGVFIQPPSTSATSASASTSCVPDLSLHISPPTTTSYAGGHHTDLSLGRREPPPPPPSLPTNMNHINEALRPIKGIPVYHNRSFPFLPMDRDHNNPNPKMCLYHHMPASSSPFPVGVGLDPISFLNSGGAGGPYNNRVAAVAAATSRFNNGIPSHQHHPLHHHYGSRFLSKLPSKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDEMSPPMGSSGMRQFQEQRGQQDMDYSSTPTLWSNNSSSNRDPWPQANSNDIDGFRPISMFQSQSIGHQIQQACDSTQIKSSLSGSNNNLECKNPSLEFTLGRPDWNGKGQA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4510 368 Gene3D - 183 240 - -
Amo13g4510 368 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 70 368 - -
Amo13g4510 368 SUPERFAMILY Homeodomain-like 181 237 IPR009057 -
Amo13g4510 368 MobiDBLite consensus disorder prediction 265 309 - -
Amo13g4510 368 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 184 237 IPR006447 GO:0003677
Amo13g4510 368 MobiDBLite consensus disorder prediction 239 309 - -
Amo13g4510 368 MobiDBLite consensus disorder prediction 1 21 - -
Amo13g4510 368 MobiDBLite consensus disorder prediction 33 64 - -
Amo13g4510 368 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 70 368 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4510 Amo-Chr13 141716737 141720728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4510 1 365 G2-like Transcription Factor Family AT5G16560 42.539 6.47e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo13g4510 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4510 - - adu:107481025 694.886