Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4504 ATGCTCTTAGATTCATTTATTGGAAACAGAGAAAATTTTCTCAAAAGAATCGGTATTTCTCTCGAGAGTTCAGTTAAGCTAAGAAATTATATTAAAAAAATAATAAAATATTGGTTCTCATTTGGCACACATCAGTTGCGAGTTATTACACACTTCCCCCATCCCAATGCCCAATCCGCACCGTTATCAGCAATCAGCACCACCTTTCTTTCTCTCTTCTCTTTTACTTCTCTTCCCAGTTCTGCACTCAATAGCACCGCCATGAGGAAGAAGAAAGCCACCTACAACTCCAAAACCACAAAGCTCAAAACTTTACCCATTTTCCTATGTGGCTTCCACTTCCTCTCCTTAATCCTCTTCACCCACTCACAACCCGCCTCCCCAGACGCACAAGCAATGCTAGCACTCAAACATGCACTAAACCCACCCGAATCACTTGGCTGGTCCGACCCGAACCCATGCAAATGGAGTCGCGTCTTCTGCTCCGATTCCAACCGGGTCACCCGGATCCAAATCGGACGCCAAGGACTTGCTGGCACAATTCCCAACAACACCCTCCAAACCCTGACCCAGTTGGAGCGCCTTGAGCTTCAGTTCAACAACATTTCGGGTCCACTACCGGACCTATCCGGGTTGGGTTCGCTTCAAGTCCTTATTCTAAGTAACAATGGCTTCACTTCCATTCCTGCAGGTTTCTTCGCCGGAATGTCACAGCTTCAGGCAGTGGAGATCGACGACAACCCTTTTCAGGCGTGGCAGCTTCCTCTGTCTCTGCAGAACGCTTCGGCGCTTCAGAACTTCTCAGCGAATAGCGCTAACATAGTTGGAAAAATCCCAGATTTTTTCAACTCTGACGTGTTTCCCGGGTTGAGCCATTTGCATTTAGCGATAAACGGCATCGAGGGTACGTTGCCTTCGGGGTTTTCCAGTTTGGAACTTCAGAGTCTGTGGCTGAACGGGCAAAAGGGTGATGCGAAGCTTGGTGGGGACGTTGATGTTTTGCAGAACATGACGTCACTGACGCAGGTTTGGTTGCACCAGAACTCGTTTTCTGGGCCTTTGCCCGATTTTTCTGGCTTCCAAAACTTGGAAGATTTGAGCTTGAGGGATAACTCTTTCACGGGTCCTGTCCCTCCCTCTCTGCAGAGCCTAAAGTCGCTTAAAGTCGTGAACTTGACTAATAACTTGTTGCAGGGTCCAGTTCCTGTGTTTGGTTCTGGTGTTGTAGTTGATATGAGTGGTTTGAACAGTTTCTGTTTGACTAAACCCGGTAATTGTGATTCCAGAGTGAATGCTCTACTTTCTATTGTTAGGTCTATGGGTTATCCCCAAAGGTTTGCTGAGAATTGGAAAGGGAATGATCCTTGTAGTGATTGGATTGGGATTACTTGTAGTAATGGGAACATTTCAGTTATTAATTTTCAGAAGATGGGGCTTAACGGCACGATATCGCCCGATTTTGCATCACTCAAGTCACTGCAAAGGTTGGTTCTTGCTGATAATAACCTTACTGGTCCAATCCCTGAGGAGCTAGCTGCTCTTCCTGTTCTTACTCAGCTGAATGTTGCAAACAATCAGCTTTATGGGAATGTTCCAAAGTTTAAGAGCAGTGTAGCTGTTACCATAAGTGGTAACAAGGATATAGGGAAGGATAAGCCTAGCCCATCCCCTCCAGGTTCGTCTCCAAATTCAACTGCTCCAAACACAATAGAAGGGAATGGTGGTCAAAAGAAGTCTTCGCATGTACTAGTGATTGTTATTGCTGTGGTTGGAGGTGTATTGTTGATTGCTTTGATTGCTTTATTGGCTTTCTGCTTGTATAGGATGAAGCAGAAACGGCTGAGCAAGGTGCAGAGTCCGCGTGAGCTAGTTGTCCACCCTCGTCATTCTGGGTCGGACAATGAAAGTGTGAAGATAACTGTTGCGGGTTCAAGTGTCAGTGTTGGTAATGTTAGTGAATCGCAAACTGTGCCTGGCAGCGAAGGAAGGGATATCCAGATGGTCGAAGCGGGAAATATGGTAATTTCTATACAAGTCCTGAGGAATGTCACTAACAATTTCAGTGAGCAAAATATATTGGGGCAAGGAGGTTTTGGAACAGTTTATAAAGGTGAATTACATGATGGCACAAAAATTGCAGTGAAAAGAATGGAGATCGGAGCAATATCCGGTAAGGGAGCGGCAGAATTTAAGTCTGAAATTGCTGTTTTGACTAAGGTTCGCCACCGGCATCTTGTCTCGCTTCTTGGCTACTGCTTGGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGGACGCTAAGTAGGCATCTTTTTAATTGGTTAGAAGAAGGACTAAAGCCGTTGGAGTGGAATAGAAGATTAACCATTGCATTGGATGTGGCAAGGGCTGTCGAGTATCTTCATAGCTTGGCCCATCAAAGCTTCATACATAGGGACTTAAAGCCTTCAAACATTCTCCTTGGAGATGATATGAGGGCGAAGGTTGCAGATTTCGGTCTTGTGCGACTTGCTCCAGAAGGCAAGGCTTCAATAGAAACAAGAATTGCAGGAACTTTTGGGTATTTGGCTCCAGAATATGCAGTTACCGGCCGAGTCACAACCAAGGTTGATGTGTTCAGCTTTGGTGTGATATTGATGGAACTATTAACCGGAAGAAGAGCACTTGACGAGACCCAGCCGGAGGATAGCGTGCACCTCGTTACATGGTTCCGCAGAATGTACATAAACAAGGACACATTCCGAAAGGCCATTGACCCCACAATCGAGCTTGATGAGGAAACGCTGGCTAGTGTACACACCGTGGCAGAGCTAGCCGGCCACTGCTGTGCGAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTCAACGTGCTTGCTTCTCTTGTAGAACTCTGGAAACCATCTGATCAGAACCCCGAAGACATATACGGCATTGACCTCGACATGTCTTTGCCGCAAGCGCTTAAGAAGTGGCAGGCTTACGAAGGTGGAAGCCAAATGGAGTCGTCGTCTTCTTCGCTCCTACCAAGCTTGGACAACACGCAGACAAGCATCCCTACCCGTCCTTACGGATTCGCCGAATCTTTCACCTCAGCAGATGGGAGGTGA 3123 0.4659 MLLDSFIGNRENFLKRIGISLESSVKLRNYIKKIIKYWFSFGTHQLRVITHFPHPNAQSAPLSAISTTFLSLFSFTSLPSSALNSTAMRKKKATYNSKTTKLKTLPIFLCGFHFLSLILFTHSQPASPDAQAMLALKHALNPPESLGWSDPNPCKWSRVFCSDSNRVTRIQIGRQGLAGTIPNNTLQTLTQLERLELQFNNISGPLPDLSGLGSLQVLILSNNGFTSIPAGFFAGMSQLQAVEIDDNPFQAWQLPLSLQNASALQNFSANSANIVGKIPDFFNSDVFPGLSHLHLAINGIEGTLPSGFSSLELQSLWLNGQKGDAKLGGDVDVLQNMTSLTQVWLHQNSFSGPLPDFSGFQNLEDLSLRDNSFTGPVPPSLQSLKSLKVVNLTNNLLQGPVPVFGSGVVVDMSGLNSFCLTKPGNCDSRVNALLSIVRSMGYPQRFAENWKGNDPCSDWIGITCSNGNISVINFQKMGLNGTISPDFASLKSLQRLVLADNNLTGPIPEELAALPVLTQLNVANNQLYGNVPKFKSSVAVTISGNKDIGKDKPSPSPPGSSPNSTAPNTIEGNGGQKKSSHVLVIVIAVVGGVLLIALIALLAFCLYRMKQKRLSKVQSPRELVVHPRHSGSDNESVKITVAGSSVSVGNVSESQTVPGSEGRDIQMVEAGNMVISIQVLRNVTNNFSEQNILGQGGFGTVYKGELHDGTKIAVKRMEIGAISGKGAAEFKSEIAVLTKVRHRHLVSLLGYCLDGNEKLLVYEYMPQGTLSRHLFNWLEEGLKPLEWNRRLTIALDVARAVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELLTGRRALDETQPEDSVHLVTWFRRMYINKDTFRKAIDPTIELDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNVLASLVELWKPSDQNPEDIYGIDLDMSLPQALKKWQAYEGGSQMESSSSSLLPSLDNTQTSIPTRPYGFAESFTSADGR* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4504 1040 PANTHER OSJNBA0070M12.3 PROTEIN 114 1040 - -
Amo13g4504 1040 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524
Amo13g4504 1040 Gene3D Transferase(Phosphotransferase) domain 1 765 981 - -
Amo13g4504 1040 ProSiteProfiles Protein kinase domain profile. 687 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4504 1040 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Amo13g4504 1040 CDD STKc_IRAK 693 963 - -
Amo13g4504 1040 MobiDBLite consensus disorder prediction 545 576 - -
Amo13g4504 1040 SUPERFAMILY L domain-like 145 534 - -
Amo13g4504 1040 MobiDBLite consensus disorder prediction 1004 1029 - -
Amo13g4504 1040 SMART LRR_typ_2 189 211 IPR003591 -
Amo13g4504 1040 SMART LRR_typ_2 490 514 IPR003591 -
Amo13g4504 1040 SMART LRR_typ_2 212 235 IPR003591 -
Amo13g4504 1040 Pfam Leucine rich repeat N-terminal domain 429 465 IPR013210 -
Amo13g4504 1040 Pfam Leucine rich repeat N-terminal domain 127 162 IPR013210 -
Amo13g4504 1040 Gene3D Ribonuclease Inhibitor 427 552 IPR032675 -
Amo13g4504 1040 Pfam Protein kinase domain 688 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4504 1040 Gene3D Phosphorylase Kinase; domain 1 648 764 - -
Amo13g4504 1040 SUPERFAMILY Protein kinase-like (PK-like) 675 976 IPR011009 -
Amo13g4504 1040 Gene3D Ribonuclease Inhibitor 126 422 IPR032675 -
Amo13g4504 1040 PANTHER RECEPTOR PROTEIN KINASE TMK1 114 1040 - -
Amo13g4504 1040 MobiDBLite consensus disorder prediction 1004 1040 - -
Amo13g4504 1040 SMART serkin_6 687 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4504 Amo-Chr13 141669944 141673985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4504 170 976 Receptor kinase-like Gene Family AT1G55610 29.384 8.58e-85 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Amo13g4504 Pkinase 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4504 - K00924 aprc:113846741 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4504 13 141669944 141673985 Amo13g4504 13 141669944 141673985 ECH