Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4468 ATGGAGCACATGATGGGTCTGCTGAGAATTCATGTCCAAAAAGGGGTTAACCTTGCTGTAAGGGATGTACTAAGCAGTGACCCTTATATCATCATCAGAATGGGCAAGCAGAAGGTGAAGACTAAGGTGGTGAAGAAGAGTATCAACCCTGAATGGAATGATGATTTGACTTTGTCTATTTCAGATCCTAGTCTCCCAGTACAGCTATTTGTGCATGACAAGGACACATTCAGCCTTGATGACAAAATGGGGGATGCTGAGTTTGATATCAGTCCGTTTGTGGAAGCGGTGAAGATGCGGCCKCAAGGCGTCCCGAAYGACACSATAGTCAAAAGGGTGCAGCCTAGCAGACAGAACTGTTTGGCAGAGGAGAGCCACATTGTGTGGAGAGATGGCAAAGTGGTTCAGAACATGGTTCTTAGGCTAAGAAATGTGGAGTCTGGTGAAGTGGAGCTACAACTCCATTGGATTGACATTCCTGGTGCCAAGGCTCTTTGA 498 0.4618 MEHMMGLLRIHVQKGVNLAVRDVLSSDPYIIIRMGKQKVKTKVVKKSINPEWNDDLTLSISDPSLPVQLFVHDKDTFSLDDKMGDAEFDISPFVEAVKMRPQGVPNDTIVKRVQPSRQNCLAEESHIVWRDGKVVQNMVLRLRNVESGEVELQLHWIDIPGAKAL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4468 165 Pfam C2 domain 6 92 IPR000008 -
Amo13g4468 165 Gene3D C2 domain 2 164 IPR035892 -
Amo13g4468 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 163 - -
Amo13g4468 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Amo13g4468 165 SMART C2_3c 7 102 IPR000008 -
Amo13g4468 165 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Amo13g4468 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4468 Amo-Chr13 140874147 140878506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4468 38 165 C2H2 Transcription Factor Family AT1G70790 56.923 1.25e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4468 - - gmx:100793531 267.7