Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4462 ATGGATCCTTCAAGCTCAGATTCTGCGCTGAATCCAGGCGATGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTGATGATGAGCTTGTTCCGAAGGTCGGAATGACCTTTAGGACCCTTGAAGATGCCGGAAAATTTTACAGGGACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCAACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCCGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGCAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACGATAGAGAATAACGACGAGGCCGATCTGTACGAAGACCGTCACATATGGGTTCCTATCTATCTGGACCACCACTTCTGGGCAGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAACTACCCAGTTTCTATATCTTCAGAATTAATCTGA 633 0.4471 MDPSSSDSALNPGDVDYEFESNEVPEPLSVVDDELVPKVGMTFRTLEDAGKFYRDYAKAAGFSTRVRCTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNDEADLYEDRHIWVPIYLDHHFWAGMRSTQRSESMHSFFNNYPVSISSELI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4462 210 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Amo13g4462 210 PANTHER OS06G0517100 PROTEIN 39 159 - -
Amo13g4462 210 PANTHER OS06G0517100 PROTEIN 164 201 - -
Amo13g4462 210 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 159 IPR031052 GO:0006355
Amo13g4462 210 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 164 201 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4462 Amo-Chr13 140788308 140791756 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g4462 FAR1 3.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4462 - - adu:110278638 336.65