Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4457 ATGTTGGAATCTCTAGCTTATTGCCAAAGCTTTAAGGGATATGACCTTACTAAGCAGAAGAGTCCAGGATGTTCTCATGKTCTTTCACGCATATGTAGAAGTTCTGTGTTCATGTTTTATTCAGTCAGCAAGCAAGTCACGCCGCAACCACGCTGTGCTAGTCATGGGATAGTTAACAGGAGTTCTTTCTCAGAAGGTTTCTTTAACAGCAAGCCTCTCTCTGTACCATTGTTTTCCGGAAGTAARGGATTCTATTCATTTAAGTATAGTCCATCGCGTTGGCAAAGACTGCAGACAAATGTAGCATATGATGTTGCTGGTGCTGTTGAAGTCATCAACGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACTGTCTTAATTGTACCCACACTCAAATCAGTTAAAACCAGTCCTATACTTGGTTTCTTCTTTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAATTTTGTCTGAATGGGGGATTCTTTTCTTGCTATTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTTAAAGCTCTTGCAAAATATGCCTTTGGGATGGGATTGGCTCAGGTTGTACTATGTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGAGCTGTTGGAACGAAAATTTTGGAATTCCTTTTCCACTCAAGGCCTGATCTAGTGAACATCAGAAGCATTGATGAAGCTGTAGTGATTGGTGCTGCTCTTTCTTTATCATCATCTGCTTTTGTTCTTCAGCTCCTTGCTGAGAAAGGTGAGCTTCCCACAAGATTTGGTTCGGCAACTCTGGGAATACTTCTTTTGCAGGACTTAGCTGTTGTTCCTCTTTTAGTCATTCTTCCAATACTAGAGACCCAGAATATGTCTGAGGAAAGTCTTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTCGAGGTTGTTGCCGATTCAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACCGTTGCTGGGATTTCACTAGGCACACAGAATTTGGGCTTCAGTGATACGCTTGGAGCATTTTTGGCTGGAGCAATCTTAGCTGAGACAAATTTCAGAACCCAGATTGAAGCAGATATAAGACCATTTAGAGGCTTGCTTCTTGGGTTATTTTTCGTAACTACGGGAACTTCAATTGACATGCAGCTCCTTTTTCGAGAGTGGCCAAATGTACTTTCACTGTTGGCAGGTTTAATTACTATCAAGACACTGATCATAACGGCGATTGGTCCTCGTGTCGGACTTACTTTACAAGAAAGTGTGAGAATAGGGTTGTTGCTCTCCCAAGGAGGYGAATTTGGATTTGTAGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCGCTTGAGCTTAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAGGCTGGAAGAAGGGCTGCTAGTTTTATTGAAGAAAAATCTAATACTGAGAATAAAGCTTCTGAGAAGGTTAACTACAATGTCAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGTCAGGTCCTTGCRAATTTCCTGGGCAGTCCATTTGCTTCAGGAGTAGACAGTGTTTCAGTAGGATGGCCTTATGTGGTTTTTGATCTTAACCCGACAGTAGTAAAGGAAGCTCAGAAACTTGGTTTTCCTATTCTTTATGGAGACGGATCACGTCCAGCTGTTCTTCAATCTGCTGGTATCTCTTCTCCTAAAGCTATCATGATTATGTACACTGGCAAGAAGAGGACAATTGAAGCTGTTCAAAGGTTGCGATTGTCTTTTCCCGCGATTCCAATATATGCAAGAGCTCAAGATCTCAAGCATCATTTAGATTTGAAGAAAGCTGGTGCAACAGATGCCATTATGGAAAATGCAGAGACTAGCTTACAGCTGGGTTCCAAGCTTCTAAAAGGCCTTGGTGTGATGTCTGATGATGTAGTATTCCTAAGCCAGCTTATTAGGGATTCCATGGAGCTACAAGCTCAAGAAGCAGTTGGTTTATCCGATCGAGACCTAGATATTATGAAACCGCTACAGGTGAGAGTTTCTGACTTGATGGAGGCAGGCGTACCAACAGCTTCACCGGAACACGAACCATCAGAAATGCACCTGAAAGATCAAGCTTCATTGGGTACAATTCAAGAKGAAGTGGTTGCTGAAGAACAAGATTATGAGCTAAGACAAGCTGTGAATTCACAAGGAAATGGTGCTCTAAATGGGAAACAAGGCACTGAAGATCAAATCTCAATGGTTGGTTCMAAAGATGCAATGGTGGACACATCATCAATCYCTTCCCACAATGCCATGGAGGAACCCTAA 2439 0.419 MLESLAYCQSFKGYDLTKQKSPGCSHXLSRICRSSVFMFYSVSKQVTPQPRCASHGIVNRSSFSEGFFNSKPLSVPLFSGSKGFYSFKYSPSRWQRLQTNVAYDVAGAVEVINDLGLDTLTFLAVTVLIVPTLKSVKTSPILGFFFAGVVLNQFGLIRNLTDVKILSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLCTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILETQNMSEESLWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADSRSSEAFVALCLLTVAGISLGTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLFREWPNVLSLLAGLITIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEEKSNTENKASEKVNYNVSEPVVILGFGQMGQVLANFLGSPFASGVDSVSVGWPYVVFDLNPTVVKEAQKLGFPILYGDGSRPAVLQSAGISSPKAIMIMYTGKKRTIEAVQRLRLSFPAIPIYARAQDLKHHLDLKKAGATDAIMENAETSLQLGSKLLKGLGVMSDDVVFLSQLIRDSMELQAQEAVGLSDRDLDIMKPLQVRVSDLMEAGVPTASPEHEPSEMHLKDQASLGTIQXEVVAEEQDYELRQAVNSQGNGALNGKQGTEDQISMVGSKDAMVDTSSIXSHNAMEEP* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4457 812 Gene3D - 114 514 IPR038770 -
Amo13g4457 812 Pfam Sodium/hydrogen exchanger family 121 506 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo13g4457 812 Gene3D - 537 706 - -
Amo13g4457 812 ProSiteProfiles RCK N-terminal domain profile. 537 669 IPR003148 GO:0006813
Amo13g4457 812 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 58 749 - -
Amo13g4457 812 Pfam TrkA-N domain 538 662 IPR003148 GO:0006813
Amo13g4457 812 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 537 675 IPR036291 -
Amo13g4457 812 MobiDBLite consensus disorder prediction 769 812 - -
Amo13g4457 812 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 58 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4457 Amo-Chr13 140744507 140752153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4457 1 787 Inorganic Solute Cotransporters AT4G04850 68.869 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4457 - - aprc:113858933 1216.45