Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4443 ATGGCTTCTCGAAACCAGAACAGGCCTCCTCGCAGCCCCTCTCACAAGAAGGTGGGTTCAGAAGAATTATTCTCGGATAAGCGTCGAAGGATCGGAGCTGACAAGATGGAGAGACAAGGAGCCACTGGAGGRAGGATAAGGACGCCATTTTCKTCCGTTAACAACCGCACGGATYCCGCAAGTGAGGCCGGAAGCGCCGAYCCCTCTGAGTGTGATACCYTTGAGTTCACCAAGGAGGARGTAGCGGCCTTGTTGAATGAGAAGATGAAGAAGGGGAATCCTTATGATAATAAGAAAAAGATGGAGCAGATGACTGACCTGATAAAGCGGCTTAAGCTTTGCGTTCGCTGGTTTAAGAAAATTGAAGAAGGAGATGCCCAAGAAAAGCAGAGGCTTGGTTCTGAACTAGAGGCAGCTCAGAAGAAGTGCAATGATATTGAGATTGAGTTGAAGAATATGATGGAGGAATTGAACAAGAGAATCTCTGATTTAGAAGAGAGAATTGCAAAGGAAGAATCAGATAAGTTGGAAGCAGATAATCGTTATAGAGAAGAAAAGGAAGCAAGGAATGCGGCTGAGAAAGTTTGTAAAGAGAAATCCACTGAGCTTGAGCGGATTCAGGGCGAGAAATCAGCTGCTGAGCGAAAGGCAAATTCAAATGAGGACTTGTACAAAAGATCACAGGAGTACAATATGAGTCTGCAGCAGTACAATAGTCGTCTTCAGTCAGATCTTGAAGCAGCTAAGGAAGCACAGAGAAAACTTGAAACAGAGAAAGCAACTGCTGTTGAAAGCCTTAGTCTTGCTAGAGGTCACAATAAGATACTGCAGAATGAGTTGGCGACTCTTAAAGCTTCACAGAGTGAAGCTCTAAATGAGAAAGAAAAATTAGCAAATGAACTAAAATGTCTTCGTGAGGAGTTAAAACAAATCAGAGATGACCGTGATTGTCAACAGAAGCAAGTAAAGAATTTAACAGCAGAAGTAGCAAAGTACAAAGAATTTACTGGGGAATCATGTAAACAATTGGATTCCTTGATAGATAAAACAAACGCCCTTGAGGAMACTTGTTCTTCTCAAAGGGAGAGAATATTCACACTCGAGCAGCACCTGGCAACTGAAAGGGAGAAGTTAAAGATGGCTGATATGTCTGTATCAGAAACAAGAACAGTGTTTGAAGATCAGAAAAGAATCATACGTGAACTGCAGGATAAATTAGCAGATAAAGAATCTCAAATAGTTGAAGGAGATAAGCTGAGGAAAAAACTTCACAACACCATTCTGGAGCTAAAAGGAAATATTCGCGTGTTCTGCCGGGTGAGACCTTTGCTACCAGATGACGGCACAGGAACTGATATGGTCGTTTCTTACCCTACATCAACAGAATCACTTGGCCGGGGAATTGAATTGGTTCAAAATGGGCAGAAGTACCCTTTTACATTTGACAAGGTGTTTAATCACGACGCTTCTCAGAATGACGTATTCCTAGAGATATCCCAGCTGGTGCAGAGTGCACTTGATGGATACAAGGTGTGTATCTTTGCGTATGGGCAAACGGGTTCAGGCAAAACTTATACAATGATGGGCAGGCCTGATGCTCCAGATTTGAAAGGGTTGATACCACGTTCTCTGGAACAGATATTCCAGACAAGCCAATCTCTGAAAGATCAGGGTTGGAAGTACAAAATGCAGGCATCAATCTTGGAAATATATAATGAGACCATCCGGGATTTGTTATCAAATAGGCCATGTGGGATTGACCAGACACGAACAGACAATGGTGTTTCTGGCAAGCAGTACAATATTAAACATGATGCAAACGGAAACACACACGTTTCTGACCTAACCATTGTGGATGTTTGTAGCGTGAACGAGATTTCCTCACTCCTAAAACAGGCTGCCCAATGCAGGTCTGTGGGAAGGACACAGATGAATGAGCATTCATCTAGAAGCCATTTTGTCTTCACTTTGCGTATTTGTGGGATAAATGAGAATACTGAACAACAAGTACAAGGTGTCTTAAATCTGATTGATCTTGCTGGAAGTGAAAGACTTTCAAGGAGTGGGGCAACTGGGGACCGGTTGAAGGAAACTCAGGCTATCAATAAAAGTCTATCATCTTTGAGTGATGTAATATTCGCTTTGGCAAAGAAAGAAGAGCATGTTCCTTTCAGGAATTCAAAACTTACATACCTTCTTCAGCCATGTCTTGCTGGTGATTCAAAAACATTGATGTTTGTCAACATTGCACCTGATCAATCATCAACCAGCGAGTCGCTTTGCTCGCTTCGTTTCGCAGCCAGAGTCAATGCGTGTGAAATCGGGGTTCCAAGGCGTCAAACTCAGACAGCCACATATCATCCATAA 2367 0.4263 MASRNQNRPPRSPSHKKVGSEELFSDKRRRIGADKMERQGATGGRIRTPFSSVNNRTDXASEAGSADPSECDTXEFTKEEVAALLNEKMKKGNPYDNKKKMEQMTDLIKRLKLCVRWFKKIEEGDAQEKQRLGSELEAAQKKCNDIEIELKNMMEELNKRISDLEERIAKEESDKLEADNRYREEKEARNAAEKVCKEKSTELERIQGEKSAAERKANSNEDLYKRSQEYNMSLQQYNSRLQSDLEAAKEAQRKLETEKATAVESLSLARGHNKILQNELATLKASQSEALNEKEKLANELKCLREELKQIRDDRDCQQKQVKNLTAEVAKYKEFTGESCKQLDSLIDKTNALEXTCSSQRERIFTLEQHLATEREKLKMADMSVSETRTVFEDQKRIIRELQDKLADKESQIVEGDKLRKKLHNTILELKGNIRVFCRVRPLLPDDGTGTDMVVSYPTSTESLGRGIELVQNGQKYPFTFDKVFNHDASQNDVFLEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDQGWKYKMQASILEIYNETIRDLLSNRPCGIDQTRTDNGVSGKQYNIKHDANGNTHVSDLTIVDVCSVNEISSLLKQAAQCRSVGRTQMNEHSSRSHFVFTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLAGDSKTLMFVNIAPDQSSTSESLCSLRFAARVNACEIGVPRRQTQTATYHP* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4443 788 ProSiteProfiles Kinesin motor domain profile. 433 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g4443 788 PANTHER KINESIN-LIKE PROTEIN 3 783 - -
Amo13g4443 788 MobiDBLite consensus disorder prediction 14 36 - -
Amo13g4443 788 Gene3D Kinesin motor domain 435 776 IPR036961 -
Amo13g4443 788 MobiDBLite consensus disorder prediction 1 75 - -
Amo13g4443 788 Pfam Kinesin motor domain 439 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g4443 788 ProSitePatterns Kinesin motor domain signature. 672 683 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo13g4443 788 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 783 - -
Amo13g4443 788 MobiDBLite consensus disorder prediction 45 62 - -
Amo13g4443 788 Coils Coil 273 328 - -
Amo13g4443 788 Gene3D - 266 434 - -
Amo13g4443 788 SMART kinesin_4 431 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g4443 788 MobiDBLite consensus disorder prediction 206 226 - -
Amo13g4443 788 CDD KISc_C_terminal 431 774 - -
Amo13g4443 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 770 IPR027417 -
Amo13g4443 788 Coils Coil 392 419 - -
Amo13g4443 788 PRINTS Kinesin heavy chain signature 508 529 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g4443 788 PRINTS Kinesin heavy chain signature 642 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g4443 788 PRINTS Kinesin heavy chain signature 722 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g4443 788 PRINTS Kinesin heavy chain signature 673 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g4443 788 Coils Coil 231 265 - -
Amo13g4443 788 Coils Coil 129 223 - -
Amo13g4443 788 MobiDBLite consensus disorder prediction 206 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4443 Amo-Chr13 140437928 140442647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4443 136 769 Calmodulin-binding Proteins AT5G65930 30.526 3.19e-75 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4443 K10405 - gmx:100818473 1144.03