Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4436 ATGGGAAACCTATATGATAATAGGCTAACAGTGTCTGTAGATGAGTTATATTTCAATGCTGAAAACAGTAGCATCAACAAGAGGGGGAGGATGGGAAGGAGGAACTATGATGCTGATGACACAGTAGTGTACAAATCCAAGAACCTTGAGACTGAYAGGAGYAGGAGACAGAAGCTSAGTGACAGGCTCTTGATGCTGCGCTCCTTAATGAACAAAGCAACAATAATTGAGGATGCCATCACTTACATTAAGAACCTTAAAGACAAAGTTGACAGTCTCACCCGAGAGCTTCAGGAAATAGAAGCAACATCGGAGACAACACTTGTAGAACCAAAGACTAACGAGACTAACAATGGTGAAGCCATGAAAGAATGGGGGATAAAGGAAGAGGTGAGAGTGACCAACATTGATGGAAAGAAGCTGTGGTTGAAGCTGATCATCGAGAAGAAGAAGGGAAGGTTCACACAGTTGATGGATGCCATTCATTCGTTTGGCATAGAGCTCATAGACACAAATGTTACAACCATGAAAGGAGCACTTTTGATCACAGCTTCTATACAGGGCATGGATGGTGAAGCCCTTGTGGTTCAGCAAACCAAAGAGTTGATGCTAGATATTATCAACTCCACACACACCTATTGA 642 0.4237 MGNLYDNRLTVSVDELYFNAENSSINKRGRMGRRNYDADDTVVYKSKNLETDRSRRQKLSDRLLMLRSLMNKATIIEDAITYIKNLKDKVDSLTRELQEIEATSETTLVEPKTNETNNGEAMKEWGIKEEVRVTNIDGKKLWLKLIIEKKKGRFTQLMDAIHSFGIELIDTNVTTMKGALLITASIQGMDGEALVVQQTKELMLDIINSTHTY* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4436 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 102 IPR036638 GO:0046983
Amo13g4436 213 SMART finulus 49 92 IPR011598 GO:0046983
Amo13g4436 213 Gene3D - 43 109 IPR036638 GO:0046983
Amo13g4436 213 Coils Coil 76 103 - -
Amo13g4436 213 PANTHER TRANSCRIPTION FACTOR DYT1 11 209 - -
Amo13g4436 213 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 11 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4436 Amo-Chr13 140394503 140395495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4436 23 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 38.424 6.14e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4436 - - adu:107480552 275.018