Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4434 ATGAATCATTCAACCTCAGATTGTCAGCTGAATCCAGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCCGTTGTTGATGATGAGCTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCGGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCGACAGCCGGTCTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTCGATCATTCACACCCCTGCTGTCCAAGCAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCAGAGAGAATCAGATGCTGCAGATTTTCATACAGTCATACCGTGTGCAACCAAATCCTCCATTGAAGCTCAGTTTCAAGAGGCGTACACTCACGCAAAGTTTAGGGAAGTCCAAGCGCAATTCAGAGGAAAGGCGAATTGCATCACCAGATTAAAGAATTCTGCTCTAGGCTATTCAGTATACGAAGTTGGAGAACAAGTTTCCAGCTCAATATTCAACAAGTTCGTGGTTACTTACGACTCATCGAGAGGGATACTGTGCCGTCACGCACTAAGCGTGTTAAGCTTCGAACAAGCAAGCCAAGTGTCACCTAGATACATACTGGAACGATGA 795 0.4428 MNHSTSDCQLNPGEVDYEFESNEVPEPLSVVDDELVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRQRESDAADFHTVIPCATKSSIEAQFQEAYTHAKFREVQAQFRGKANCITRLKNSALGYSVYEVGEQVSSSIFNKFVVTYDSSRGILCRHALSVLSFEQASQVSPRYILER* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4434 264 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 148 IPR031052 GO:0006355
Amo13g4434 264 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 158 264 IPR031052 GO:0006355
Amo13g4434 264 PANTHER OS03G0843700 PROTEIN 26 148 - -
Amo13g4434 264 PANTHER OS03G0843700 PROTEIN 158 264 - -
Amo13g4434 264 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4434 Amo-Chr13 140369711 140372186 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g4434 FAR1 5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4434 - - adu:110278638 307.76