Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4425 ATGGCCCAAAACCATTATTCTCTGCTTAGTTCTTTGAGTGTAGTCCTTCTCAGCATCTCACTTACCTCATGTTCTGATACAATTACCATTGACAAAGCCCTCAGAGATGGTGAGATTCTTGTTTCTAAGAGCAAAACCTTTGCCATGGGATTCTTTAGTCCAGGCAAATCCACTTCCCGTTACATCGGAATCTGGTACAACAACTTGCCAGAACAAACTGTGATTTGGGTTGCAAACAGAAACACTCCCATCAACGACACATCAGGGGTTCTCTCAATGAACCACCATGGAAATCTAGCACTCTATAACAACTATACCACTCTTCCAATTTGGTCTTCAAATGTTTCACTCACACACTCCAACAACAACGTTGTAGCTCAACTCTTGGACACAGCAAACTTTGTTCTGTTCCAAAACAACACCGGAACCATCATATGGCAAAGCTTTGATCACCCTACTGACACCTTCATTCAGCACTTGAAAGTTGGTTTTGACAGAAGAAGTAACAAGAGCTGGTTCCTCCAATCATGGAAGACAGATGATGACCCTGCTCCTGGTGCATACACGTTGGGATTCAACCCCAATGGGAAGCCACAGCTGTTCTTATACAACAAGAACCTTCCATGGTGGCGAGGAGGATCATGGAACGGTGAATTGCTCATGGGTATACCAAACATGAAACGAGACATGCTCAAATTCAATATTTCTTATGAGGAAGATGAAAACCATTCAGCACTCTCATACACCATGTTTGATGAGTCCATTGTGAGCAGAATAGTGGTTCAGCAATCAGGTTTCTTTCAAGTGTTCACCTGGGATTTCCAGAAGAGTCAGTGGAACCGGTACTGGTCAGAGCCAACAGGTCTATGTGATAACTATGGAACATGTGGATCTAACAGTAACTGTGACCCTTTGGACTATGATGAGGCCTTTCAGTGTAGTTGTTTACCTGGGTTTGAACCCAAGTTCCCGCGAAACTGGTATGAGAACAGAGATGGATCAGGAGGGTGTGTGAGGAAGAAAGGGGTGTCTGTTTGTGAGAATGGGGAAGGGTTTGAGAAGATTGAAAGCTTGAAGATTCCTGATACATCTATGAAGCTCAGTGATCAAGGCCAAGATCTTTTTGTCCGTGTCGACTCTTTTGAGCTAGCCAAGTACTATAAAAGACCAAGATTGTTTGGTAAAGACAAGTTGGTAGCGGCTCTGGTAGCTTTCATGCTTCTGGTTCTCCTTCTAGTGTCCAGTGTGTATTACTTGTGGAAGAAGAGTAAAAACAAAGAGAAAATGATGTGGGATTTAAATCATGATTCTCCAAGAGAAGAAAACGATGTTCAAAGCAAAAGACATCCAAACCTTCCCTTATTCAGTTTTAAAATGATAATGGCAGCCACAGAAAAATTTTCTCCAGATAATAAGCTAGGCCAAGGTGGATTTGGCTCTGTCTATAAGGGTCATCTATTTGATGGACAGGAGATAGCAGTAAAAAGACTCTCCAAAGATTCAGGTCAAGGAATAGAAGAGTTCATAAATGAAGTTACACTGCTAGTTAAACTCCAACACAGAAATCTTGTGAGGTTGCTCGGTTGTTGCCTTGAGAAGGAAGAAAGGATGCTAGTTTACGAATACCTTCCAAACAAAAGCCTAGACTTCCTTATATTTGATGAAGTTCGAAGATCATCGTTAGATTGGGGTCAACGCTTTAAAATTATTTCGGGAATTGCTCGAGGTGTATTGTATCTTCATCAAGATTCAAGATTGAAAATAATTCACAGAGATCTAAAAGCCAGCAATGTTCTTCTTGATGCTGTAATGAATCCCAAAATCTCAGACTTTGGAATGGCTAGAATATTTGGAGAAGAACAAATCCATGCAAGTACAAAAAAAGTAGTTGGAACCTATGGTTATATGTCACCTGAATATGCAATGGAAGGACGATACTCTACAAAATCAGATGTCTTCAGTTTCGGAGTCTTGTTATTGGAGATTATTGCTGGAAAAAGAAATACAAATTGTGAAAAAGGAAGAGCAGCCTCCTTAATTGGATATGTGTGGAAACTTTGGACTGAAGGAAGGGCCTTGGATGTTGTAGATTCAACACTAGGCCAATCTTATCCTCCTGAAATAGCACTGAGGTGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAGCATCAACAATAGACCTTCCATGTTAGAAGTTGTTTTCATGCTATGCAATGAAGCACCTATTTGTTCACCTCAGAAGCCAGCATTTTTATTCAATGGCAACCTGGACATGAAAGATTCATCAACATCTGGAGGAGGATCTTCAGTAAATGAAGTGACAGTAACTACCATCTCTGCTAGATAA 2349 0.4083 MAQNHYSLLSSLSVVLLSISLTSCSDTITIDKALRDGEILVSKSKTFAMGFFSPGKSTSRYIGIWYNNLPEQTVIWVANRNTPINDTSGVLSMNHHGNLALYNNYTTLPIWSSNVSLTHSNNNVVAQLLDTANFVLFQNNTGTIIWQSFDHPTDTFIQHLKVGFDRRSNKSWFLQSWKTDDDPAPGAYTLGFNPNGKPQLFLYNKNLPWWRGGSWNGELLMGIPNMKRDMLKFNISYEEDENHSALSYTMFDESIVSRIVVQQSGFFQVFTWDFQKSQWNRYWSEPTGLCDNYGTCGSNSNCDPLDYDEAFQCSCLPGFEPKFPRNWYENRDGSGGCVRKKGVSVCENGEGFEKIESLKIPDTSMKLSDQGQDLFVRVDSFELAKYYKRPRLFGKDKLVAALVAFMLLVLLLVSSVYYLWKKSKNKEKMMWDLNHDSPREENDVQSKRHPNLPLFSFKMIMAATEKFSPDNKLGQGGFGSVYKGHLFDGQEIAVKRLSKDSGQGIEEFINEVTLLVKLQHRNLVRLLGCCLEKEERMLVYEYLPNKSLDFLIFDEVRRSSLDWGQRFKIISGIARGVLYLHQDSRLKIIHRDLKASNVLLDAVMNPKISDFGMARIFGEEQIHASTKKVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTNCEKGRAASLIGYVWKLWTEGRALDVVDSTLGQSYPPEIALRCIQIGLLCVQESINNRPSMLEVVFMLCNEAPICSPQKPAFLFNGNLDMKDSSTSGGGSSVNEVTVTTISAR* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4425 782 Pfam S-locus glycoprotein domain 210 323 IPR000858 GO:0048544
Amo13g4425 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Amo13g4425 782 SMART blect_4 31 152 IPR001480 -
Amo13g4425 782 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Amo13g4425 782 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 11 365 - -
Amo13g4425 782 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 369 779 - -
Amo13g4425 782 ProSiteProfiles Protein kinase domain profile. 467 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4425 782 PANTHER - 11 365 - -
Amo13g4425 782 PANTHER - 369 779 - -
Amo13g4425 782 ProSiteProfiles EGF-like domain profile. 286 325 IPR000742 -
Amo13g4425 782 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Amo13g4425 782 Gene3D Phosphorylase Kinase; domain 1 441 542 - -
Amo13g4425 782 CDD STKc_IRAK 473 739 - -
Amo13g4425 782 Gene3D - 20 150 IPR036426 -
Amo13g4425 782 SMART serkin_6 467 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4425 782 Pfam D-mannose binding lectin 73 178 IPR001480 -
Amo13g4425 782 CDD B_lectin 34 152 IPR001480 -
Amo13g4425 782 Gene3D Transferase(Phosphotransferase) domain 1 543 744 - -
Amo13g4425 782 PIRSF SRK 1 374 IPR024171 GO:0004674
Amo13g4425 782 PIRSF SRK 364 782 IPR024171 GO:0004674
Amo13g4425 782 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Amo13g4425 782 Pfam Protein tyrosine and serine/threonine kinase 470 734 IPR001245 GO:0004672|GO:0006468
Amo13g4425 782 SUPERFAMILY Protein kinase-like (PK-like) 450 749 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4425 Amo-Chr13 140301581 140305153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4425 398 769 Receptor kinase-like Gene Family AT4G05200 51.724 2.80e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo13g4425 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4425 - - mtr:MTR_4g091840 1083.17