Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4415 ATGACGTCACACCCACTCCATCCCACCTGCGACTTCGACACCGACTCCGTCGCCTCCTCCCCTCGCTCCGACCACTTCCACGACCCCCCTCAACGCGTCCGCTTCATGTGCAGCTTCGGCGGCAAGATCCTCCCTCGTCCTCACGACAACCAGCTCCGCTATGTCGGCGGTGACACCCGCATACTTGCCATCAACCGCTCCATCTCCTTCCCCGCCTTCCTCCTCAAGCTCTCCAAGCTATCAGGTATGACCAACATAACCGCCAAGTACCAGCTTCCCAACGAGGACCTTGACGCGCTWATTTCTGTCACCACCGACGAAGACGTCGAGAACATGATGGACGAGTACGACCGCGTCGCACACAATCAAAATCCCCGATCCGCTCGTCTCCGCCTCTTCCTCTTTCCGGAATCATCCGCCGCCGACGATACCTCCCGAGCCGGCAGCATCAGCTCCCTCCTCAACGGCTCCGTTAAACGCGAGAGCTGGTTCCTCGACGCCCTCAACGGCGGCGTCTCAGCCCTCGAGCGAGGCCGCTCCGAAGCTTCCTCCATGGTCTCGGAGGTTCCCGATTACCTCTTCGGGTTGGACAACTCCGAAGAAACGCAAAGCAACCGCGAATTACGACATAAGGACCGACCCMGTCTATATTCGGATCCGGGTTCTCCTGCCCCAGTTGCGTCTCAATTTTCCTCCACATCATCAGTGCCGTGCGTGCCATCTATCCCCAACCTTCCACCAGTTAAAACCAAACCGGCGAACCCGGCTCCTGAAGTGGAGTCCAAGGAGATTCAAATCGAAGCTGAACCGGCTCCACAACCTCAACCGCAACCAAACACGTACCCGGGTAACACTGTTCTGCACTACGCCGCGGATGCCTCCTATTCGGGCCATTCTGTTCAACCGGTTCCGGTTTACTATTTTCCCGGTCCGGTTCAACCAGGAACTCTTCCGGTTCATATGCAGGCTCCATATCCATACGTTCAACAACCGTATCATGCAGTGGTTCCGGGTCAGGTTCCAGTCGGGTACCGTCATTTTGTTCCGGGTTCGGGTCAAGTATATGGCGCAGGTCTGAGGCATGTAAGCCCGATGCACCATCCATACAGTGCATCTGCCACAGCAGCTGTGGTTCAAGACGGTGTGAAACAGCAGGTGTATCAGGCAGTGCCTGGTTCCGGTTACCCAGCAATGGTAATGACAGGTGGGGATGAACCACAGAGAGGTGGTTCGGAGTTTGTGGTGGGTCGGATCGGGTCGCCAACTCCCTAA 1272 0.5715 MTSHPLHPTCDFDTDSVASSPRSDHFHDPPQRVRFMCSFGGKILPRPHDNQLRYVGGDTRILAINRSISFPAFLLKLSKLSGMTNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAHNQNPRSARLRLFLFPESSAADDTSRAGSISSLLNGSVKRESWFLDALNGGVSALERGRSEASSMVSEVPDYLFGLDNSEETQSNRELRHKDRPXLYSDPGSPAPVASQFSSTSSVPCVPSIPNLPPVKTKPANPAPEVESKEIQIEAEPAPQPQPQPNTYPGNTVLHYAADASYSGHSVQPVPVYYFPGPVQPGTLPVHMQAPYPYVQQPYHAVVPGQVPVGYRHFVPGSGQVYGAGLRHVSPMHHPYSASATAAVVQDGVKQQVYQAVPGSGYPAMVMTGGDEPQRGGSEFVVGRIGSPTP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4415 423 MobiDBLite consensus disorder prediction 202 216 - -
Amo13g4415 423 Gene3D - 53 136 - -
Amo13g4415 423 MobiDBLite consensus disorder prediction 196 285 - -
Amo13g4415 423 MobiDBLite consensus disorder prediction 224 239 - -
Amo13g4415 423 SMART PB1_new 47 137 IPR000270 GO:0005515
Amo13g4415 423 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 417 - -
Amo13g4415 423 PANTHER OS05G0427100 PROTEIN-RELATED 1 417 - -
Amo13g4415 423 SUPERFAMILY CAD & PB1 domains 48 140 - -
Amo13g4415 423 MobiDBLite consensus disorder prediction 1 17 - -
Amo13g4415 423 Pfam PB1 domain 48 136 IPR000270 GO:0005515
Amo13g4415 423 CDD PB1_UP2 36 135 - -
Amo13g4415 423 MobiDBLite consensus disorder prediction 1 29 - -
Amo13g4415 423 MobiDBLite consensus disorder prediction 398 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4415 Amo-Chr13 140151494 140153224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4415 22 145 MAP Kinase Kinase Kinase AT3G46920 45.161 1.87e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4415 - - aprc:113858359 603.594