Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4405 ATGGCTGACGATGAGGATTTCCAAGGTGCAGCAGGGATTTGCGGTGAGAACTGGTGGAGGAGTATTGATTCAACAAGGAGTGTGTTTCCTCCTCTAACCTCATCATCACCATCTTCAACTTCACCTTGTTCCGTGGCACCACCCACCGACACTAGAACTTGGCCAAGTAGTGATGATCATCATCATTGTTTCATGGATTTGAAGGCACCGGCGTGTGATATTATTAGTAACAATAATAATAATAATTACCATATGAGTTTTCATGATGCGCAAGAGAAGCCACACAACAACAAGACTACTACTAATGAATCACAAAGTGGAAGCATGTTGATCGATTCAACCTTCCAAATGATGGGTTTTGGCTTGTCTTCACCCAATTGGGATCATCAATCTCTGTTTACCATGGATGTTTTCAAGCGCATGAACAACCAAGAATTTTCCTCATCAACTTATGGTTACCCGTCATCAACACTGATTCAAACATTATATGATCCACAGCAGCAGCCACAGCGCTCATCATCATCATCATCATCATCACTTTTCACCAACCGTTCCATGTCCTATTCATCATCTTCTACAGTGAATTATCATCATGCCTCCAATGAAGTGTCACTGTCACCAATCACATGGCCTAAACTCTTTTCTTCTTCTTCTTCTTCATCATCATCTTCTTCTTTATCACTACTTCCCCCAATGGCAAAGCACCCTGACAATAACAATATTGGACTTCACTTTTCCAACAACAACACCCCTTTCTGGAACGCTTCCTCCGACGCACTTCACGACATTAGAGCAGGTGCTTTTCCTTTTGAAGAAGAAGACAACAAACCCAATTCCCCCATTATTCTACTCAACAAGCTTAAGAGCGAAGAATTGTGTGTGGACTCGGTAAAGAAAAATAATAATGTTTGCTCATCACCACCTCCATTCAAAAGGGCAAGAATTGAAACTCCACCCCCTTTACCAACTTTTAAGGTTCGGAAAGAGAAGTTAGGGGACCGAGTTACTGCTCTTCAGCAACTGGTTTCACCTTTCGGAAAGGTGAATTTCCCAACATGCATGTCTCTTTCACCTTTTTTTCTTTCTTTCTAG 1092 0.4176 MADDEDFQGAAGICGENWWRSIDSTRSVFPPLTSSSPSSTSPCSVAPPTDTRTWPSSDDHHHCFMDLKAPACDIISNNNNNNYHMSFHDAQEKPHNNKTTTNESQSGSMLIDSTFQMMGFGLSSPNWDHQSLFTMDVFKRMNNQEFSSSTYGYPSSTLIQTLYDPQQQPQRSSSSSSSSLFTNRSMSYSSSSTVNYHHASNEVSLSPITWPKLFSSSSSSSSSSSLSLLPPMAKHPDNNNIGLHFSNNNTPFWNASSDALHDIRAGAFPFEEEDNKPNSPIILLNKLKSEELCVDSVKKNNNVCSSPPPFKRARIETPPPLPTFKVRKEKLGDRVTALQQLVSPFGKVNFPTCMSLSPFFLSF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4405 363 MobiDBLite consensus disorder prediction 30 53 - -
Amo13g4405 363 PANTHER TRANSCRIPTION FACTOR BHLH103 51 347 - -
Amo13g4405 363 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 347 - -
Amo13g4405 363 CDD bHLH_AtbHLH_like 321 349 IPR045239 -
Amo13g4405 363 MobiDBLite consensus disorder prediction 83 106 - -
Amo13g4405 363 MobiDBLite consensus disorder prediction 30 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4405 Amo-Chr13 139965128 139968431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4405 5 363 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 28.283 7.81e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4405 - - ahf:112791361 620.542