Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4404 ATGGGAAACCTATATGATAATAGGCTAACAGTGTCTGTAGATGAGTTATATTTCAATGCTGAAAACAGTAGCATCAACAAGAGGGGGAGGATGGGAAGGAGGAACTATGATGCTGATGACACAGTAGTGTACAAATCCAAGAACCTTGAGACTGAAGGAGAGGAGACAGAAGCTAGTGACAGGCTCTTGATGCTGCGCTCCTTAATGAACAAAGCAACAATAATTGAGGATGCCATCACTTACATTAAGAACCTTAAAGACAAAGTTGACAGTCTCACCCGAGAGCTTCAGGAAATAGAAGCAACATCGGAGACAACACTTGTAGAACCAAAGACTAAGAGACTAACAATGGAAGAGGTGAGAGTGACCAACATTGATGGAAAGAAGCTGTGGTTGAAGATGATCATAGAGAAGAAGAAGGGAAGGTTCACACAGTTGATGGATGCCATTCATTCGTTTGGCATAGAGCTCATAGACACAAATGTTACAACCATGAAAGGAGCACTTTTGATCACAGCTTCTATACAGGGCATGGATGGTGAAGCACTTGTGGTTCAGCAAACCAAAGAGTTGATGCTAGATATTATCAACTCCACACACAGCTATTGA 609 0.4187 MGNLYDNRLTVSVDELYFNAENSSINKRGRMGRRNYDADDTVVYKSKNLETEGEETEASDRLLMLRSLMNKATIIEDAITYIKNLKDKVDSLTRELQEIEATSETTLVEPKTKRLTMEEVRVTNIDGKKLWLKMIIEKKKGRFTQLMDAIHSFGIELIDTNVTTMKGALLITASIQGMDGEALVVQQTKELMLDIINSTHSY* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4404 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 61 101 IPR036638 GO:0046983
Amo13g4404 202 Coils Coil 75 102 - -
Amo13g4404 202 Gene3D - 41 106 IPR036638 GO:0046983
Amo13g4404 202 PANTHER TRANSCRIPTION FACTOR DYT1 11 198 - -
Amo13g4404 202 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 11 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4404 Amo-Chr13 139935762 139936654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4404 30 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 36.735 4.47e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4404 - - adu:107480552 240.736