Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4396 ATGTCAGCGTACAGATGGAAGAGCTTCGAGGAGAACGAGGACCGCCCCTCCAAGCCTCGCCGCTACGGCGTCACCGAGATGAGAAGCCCTGATTACTCTCTCTTCAACCACAATGTTCTTCAGGATATATTTGAATCAATGGGAGAGTACGTTGACGGATTGAAGTTTTCTGGAGGGTCTCACAGCTTGATGCCAAAGTCACTTCTCAAAGAAGTGATCGACATGGCTCATCACCACGATGTGTACGTTAGCACTGGTGATTGGGCTGAGCACACCATTCCCAAAGGTCCTTCTGCTTTCAAAGATTTTGTTGAGGAATGCAAGCAGATGGGTTTTGACACAATTGAGCTCAATGTGGGCTCACTTGGGATTCCCGAAGAGACTCTTCTCAGATTTGTCAGATTGATTAAGAGTGGTGGCATGAAAGCTAAGCCTCATTTTGAGGTCAAGATTAAGGAGTCTGATATTCCAAGAGGTCCTTATAGGGCTTTTGGGGCTTATATTCCTCCTTCAGCGCCCAGATCATCTGAATTTGTGGAAGATGTGGATCTCTTGATCAGAAGGGCTGAGAGATGTTTGGAAGCCGGTGCGGACATGATAATGATTGATGCTGATGATCTTTCCAAACATGCTGATAACATGCGCGCAGACCTTATAGCGAAGATCATAGGGCGGCTTGGGATTGAGAAGACTATGTTTGAAGCATCAAATCAGAGAACATCCGAGTGGTTTATCAAACAATATGGTCCAAATGTGAATCTCTTCATAGATCACTCGGATGTTGTTGATGTGGAATGCCTCCGAGGGCGCAACTTGGGAAGAAATCATGCATCTGTTCTTGGTTCTTCATATTTCCTGTTCTGA 864 0.4572 MSAYRWKSFEENEDRPSKPRRYGVTEMRSPDYSLFNHNVLQDIFESMGEYVDGLKFSGGSHSLMPKSLLKEVIDMAHHHDVYVSTGDWAEHTIPKGPSAFKDFVEECKQMGFDTIELNVGSLGIPEETLLRFVRLIKSGGMKAKPHFEVKIKESDIPRGPYRAFGAYIPPSAPRSSEFVEDVDLLIRRAERCLEAGADMIMIDADDLSKHADNMRADLIAKIIGRLGIEKTMFEASNQRTSEWFIKQYGPNVNLFIDHSDVVDVECLRGRNLGRNHASVLGSSYFLF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4396 287 Gene3D Aldolase class I 7 275 IPR013785 -
Amo13g4396 287 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 14 271 IPR003830 -
Amo13g4396 287 PANTHER PROTEIN HEAT-STRESS-ASSOCIATED 32 13 287 - -
Amo13g4396 287 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 13 287 - -
Amo13g4396 287 MobiDBLite consensus disorder prediction 7 23 - -
Amo13g4396 287 MobiDBLite consensus disorder prediction 1 23 - -
Amo13g4396 287 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 13 268 IPR036112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4396 Amo-Chr13 139891951 139894354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4396 4 287 Subtilisin-like Serine Gene Family AT4G21320 73.592 3.13e-162 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4396 - - gmx:100805668 481.87