Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4394 ATGGGTATTATTCTCCTGTACATCATCCAAGCCTTCTTGTGTTTCTTGCTCGCCACCGTTTTCACACCAGGCCATGCTACTCTCACAGATATATTCTGTTTGAAATCCATCAAGGAGTCCTTGGAAGATCCAGATAACTACTTACAATCCTGGGACTTCAGCAACTACACCGAAGGTTTCATATGTAGATTTACTGGTGTTGATTGCTGGCATCCCGATGAAAATAGAGTGCTCAATCTGAAACTATCGAACATGGGTCTCAAGGGGGAGTTCCCGCGGGGCATTCGGAATTGTTCATCTTTGACTGGCTTGGACCTTTCTATAAACCACTTATCGGGACACATCCCTTCTGATATATCATCAATCCTCACTTATGCTACCACCCTTGATCTCTCAAGTAACATGTTCAGCGGAGAGATTCCACCATCTTTGGCTAACTGCACTTTCCTGAATTATCTCAAGCTTGATGACAACAAGCTCAGTGGTGGAATCCCACCAGAATTTGCGAGTCTCCGCAGGCTTAAGACACTGTCTTTGACCAATAATGAGTTGTCAGGACCAGTACCTAACTTCCCAAGTGGTCGAAGTGTTAGCTATGGTAATAATAGAGGGCTTTGTGGAGGGCCTTCTTTGTTACCGTGCTCCTCGCACAAGCACCTCCACCTGCACCTGCACCTAACATTTAAGGTTGCCCTCCTCCTTGCTTTTGTTTTCTCCTTCATCGTTTGTGTTGTTGTGCGCACTATGTGCTTCCGTTCTTCTTCTAGGACTAGGAAACACATGAAGCCCGCCAAATTCAACCACCCAGATACATTGAAATATGTTTGTTCCCTCATAAGGTGGAAGATGCGACCGCTTGTTTATCACATACGCCAACTGCTACCTCTGCACTTGCAACACAATGGAACCCAACAGATAGCGGTACTAGTGGAAAGATTGACATCCACTATGAACTTAGAAGAACTCAATGATGCTACCGAAAGCTTTTCTATTGACAATGCCATAGGGGTGGGAAAAATGGGAATAATGTATGAGGGAGTTCTAGCTAATGGTTGGCACCTTGCCGTTAAGAGGCTATCCGATTCTCAACTGTTTGAGAGACAAGTTCTTTTAGAGATAAGGATTCTTGGGAAGCTTCAACACAGAAACATAGTTCCTCTGCTTGGATTCTGTGTGGATAATAAGGAAAGGATTCTGGTGTACCAATATACATCAAATGGAAGACTTTCCAAATGGTTGCATCCTCTGGAATCTGAGGCTGTGATATTGACATGGTCACAGAGGATCAAGATTGCACTTGGTATGGCTAGAGCCTTATCTTGGCTTCATCACACTTGCAATTGGCATGTTGTCCATCTTAATGTATCTTCTGAGTGTGTCTTGCTTGATGAGAGTTTTGAACCAAAACTATCAAATTTTGGAGAGGCTAAGTTTATGAACCCCAACAAACATGATGATCTAGGCATGACATTTTATGTAGAGGATGGCAAGAAGGATGTTTTTGATCTTGGTAGTGTGCTTCTTGAACTGGTCACCGGAAAAACATTGAAGGAATTGGTGTGTTTATCTAACAATGCTGACTTATCTGGTGACCCTTCAACTATTTATGATGCAATTGACAAGTCTCTTATTGGGAAAGGATTTGAAAATGAAGTGTTTACTCTTGTCAAAGTTGCTTGTGAGTGTATTCAGCCTTTTCCAGATGACAGGCCAACAATGCTTCAAGTTTACAACAGCATGACCAATGTATGGGAAGAGAATCATGAGTTTATTGATCATTCTAACATGCTTGCTAGGGAATTAGAAATTGTTTCTGCTACTACGAATAGTGGTGAAATTGTTGAGTTATAA 1851 0.4225 MGIILLYIIQAFLCFLLATVFTPGHATLTDIFCLKSIKESLEDPDNYLQSWDFSNYTEGFICRFTGVDCWHPDENRVLNLKLSNMGLKGEFPRGIRNCSSLTGLDLSINHLSGHIPSDISSILTYATTLDLSSNMFSGEIPPSLANCTFLNYLKLDDNKLSGGIPPEFASLRRLKTLSLTNNELSGPVPNFPSGRSVSYGNNRGLCGGPSLLPCSSHKHLHLHLHLTFKVALLLAFVFSFIVCVVVRTMCFRSSSRTRKHMKPAKFNHPDTLKYVCSLIRWKMRPLVYHIRQLLPLHLQHNGTQQIAVLVERLTSTMNLEELNDATESFSIDNAIGVGKMGIMYEGVLANGWHLAVKRLSDSQLFERQVLLEIRILGKLQHRNIVPLLGFCVDNKERILVYQYTSNGRLSKWLHPLESEAVILTWSQRIKIALGMARALSWLHHTCNWHVVHLNVSSECVLLDESFEPKLSNFGEAKFMNPNKHDDLGMTFYVEDGKKDVFDLGSVLLELVTGKTLKELVCLSNNADLSGDPSTIYDAIDKSLIGKGFENEVFTLVKVACECIQPFPDDRPTMLQVYNSMTNVWEENHEFIDHSNMLARELEIVSATTNSGEIVEL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4394 616 PANTHER RECEPTOR-LIKE PROTEIN 55 8 583 - -
Amo13g4394 616 SUPERFAMILY Protein kinase-like (PK-like) 311 579 IPR011009 -
Amo13g4394 616 Gene3D Phosphorylase Kinase; domain 1 293 403 - -
Amo13g4394 616 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 8 583 - -
Amo13g4394 616 SUPERFAMILY L domain-like 28 320 - -
Amo13g4394 616 Pfam Protein kinase domain 331 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4394 616 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Amo13g4394 616 Gene3D Transferase(Phosphotransferase) domain 1 404 603 - -
Amo13g4394 616 ProSiteProfiles Protein kinase domain profile. 329 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4394 616 Gene3D Ribonuclease Inhibitor 30 216 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4394 Amo-Chr13 139857868 139860075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4394 5 587 Receptor kinase-like Gene Family AT3G28450 36.482 1.18e-112 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Amo13g4394 Pkinase 2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4394 - - gmx:102664092 673.315