Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4389 ATGACGTCACACCCACTCCATCCCACCTGCGACTTCGACACTGACTCCGTCGCCTCCTCCCCTCGCTCCGACAACTTCCACGACGCCCCTCAACGCGTCCGCTTCATGTGCAGCTTCGGCGGCAAGATCCTCCCTCGTCCTCACGACAACCAGCTCCGCTACGTCGGCGGTGACACCCGCATACTTGCCGTCAACCGCTCCATCTCCTTCCCCGCCTTCCTCCTCAAGCTCTCCAAGCTATCAGGTATGACCAACATAACCGCCAAGTACCAGCTTCCCAACGAGGACCTTGACGCGCTWATTTCTGTCACCACCGACGAAGACGTCGAGAACATGATGGACGAGTACGACCGCGTCGCACACAATCAAAATCCCCGATCCGCTCGTCTTCGCCTTTTCCTCTTTCCGGAATCATCCGTCGCCGACGATACCTCCCGAGCCGGCAGCATCAGCTCCCTCCTCAACGGCTCCGTTAAACGCGAGAGCTGGTTCCTCGATGCCCTCAACGGTGGCGTCTCAGCCCTCGAGCGAGGCCGCTCCGAAGCTTCCTCCATGGTCTCGGAGGTTCCCGATTACCTCTTCGGGTTGGACAACTCCGAAGAAACGCAAAGCAACCGCGAATTACGACATAAGGACCGACCCMGTCTATATTCGGATCCGGGTTCTCCTGCCCCAGTTGCGTCTCAATTTTCCTCCACATCATCAGTGCCGTGCGTGCCATCTATCCCCAACCTTCCACCAGTTAAAACCAAACCGGCGAACCCGGCTCCTGAAGTGGAGTCCAAGGAGATTCAAATCGAAGCTGAACCGGCTCCACAACCTCAACCGCAACCAAACACGTATCCGGGTAACACTGTTCTGCACTACGCCGCGGATGCCTCCTATTCGGGCCATTCTGTTCAACCGGTTCCGGTTTACTATTTTCCCGGTCCGGTTCAACCAGGAACTCTTCCGGTTCATATGCAGGCTCCATATCCATACGTTCAACAACCGTATCATGCAGTGGTTCCGGGTCAGGTTCCAGTCGGGTACCATCATTTGGTTCCGGGTTCGGGTCAAGTATATGGCGCAGGTCTGAGGCATGTAAGCCCGATGCACCATCCATACAGTGCATCTGCCACAGCAGCTGTGGTTCAAGACGGTGTGAAACAGCAGGTGTATCAGGCAGTGCCTGGTTCCGGTTACCCAGCAATGGTAATGACAGGTGGGGATGAACCACAGAGAGGTGGTTCGGAGTTTGTGGCGGGTCGGGTCGGGTCGCCAACTCCCTAA 1272 0.5684 MTSHPLHPTCDFDTDSVASSPRSDNFHDAPQRVRFMCSFGGKILPRPHDNQLRYVGGDTRILAVNRSISFPAFLLKLSKLSGMTNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAHNQNPRSARLRLFLFPESSVADDTSRAGSISSLLNGSVKRESWFLDALNGGVSALERGRSEASSMVSEVPDYLFGLDNSEETQSNRELRHKDRPXLYSDPGSPAPVASQFSSTSSVPCVPSIPNLPPVKTKPANPAPEVESKEIQIEAEPAPQPQPQPNTYPGNTVLHYAADASYSGHSVQPVPVYYFPGPVQPGTLPVHMQAPYPYVQQPYHAVVPGQVPVGYHHLVPGSGQVYGAGLRHVSPMHHPYSASATAAVVQDGVKQQVYQAVPGSGYPAMVMTGGDEPQRGGSEFVAGRVGSPTP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4389 423 MobiDBLite consensus disorder prediction 202 216 - -
Amo13g4389 423 PANTHER OS05G0427100 PROTEIN-RELATED 1 417 - -
Amo13g4389 423 MobiDBLite consensus disorder prediction 1 26 - -
Amo13g4389 423 MobiDBLite consensus disorder prediction 196 285 - -
Amo13g4389 423 Gene3D - 53 136 - -
Amo13g4389 423 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 417 - -
Amo13g4389 423 MobiDBLite consensus disorder prediction 224 239 - -
Amo13g4389 423 CDD PB1_UP2 36 135 - -
Amo13g4389 423 Pfam PB1 domain 48 136 IPR000270 GO:0005515
Amo13g4389 423 SMART PB1_new 47 137 IPR000270 GO:0005515
Amo13g4389 423 SUPERFAMILY CAD & PB1 domains 48 139 - -
Amo13g4389 423 MobiDBLite consensus disorder prediction 398 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4389 Amo-Chr13 139826237 139828048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4389 22 145 MAP Kinase Kinase Kinase AT3G46920 45.968 3.59e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4389 - - aprc:113858359 606.29