Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4358 ATGCCCTTGGAAGGGGTTTTTACTTCTGCTTCTGCTTCTGCTTCTACTTCTTGTGTTCCTGATCTTTCCCTTCACATAAGCCCTCCAACCACCACCAGCTATGCCGGAGGACATCACACCGACCTCTCTCTTGGAAGACGAGAACCACCGCCACCGCCACCATCACTGCCAACTAACATGAACCACATAAACGAAGCCTTGAGACCCATCAAAGGGATCCCCGTTTATCACAACCGTTCTTTCCCTTTCTTACCCATGGATAGGGATCACAATAATCCAAATCCCAAGATGTGCTTATATCATCACATGCCTGCATCTTCTTCTCCTTTCCCAGTGGGAGTGGGTTTAGATCCCATTTCCTTCTTGAATTCCGGGGGAGCAGGAGGGCCTTATAATAATAGGGTTGCGGCGGTGGCTGCTGCCACAAGTAGGTTCAATAATGGGATCCCAAGCCATCAGCATCATCCATTGCACCACCACTACGGGTCAAGGTTCTTGTCTAAGCTGCCAAGCAAGAGGAGCATGAGAGCACCCAGGATGCGGTGGACTAGCACCCTCCATGCTCGATTTGTTCACGCCGTTGAGCTTCTTGGTGGCCATGAAAGAGCAACACCCAAGTCCGTACTTGAGTTGATGGATGTCAAAGATCTCACATTAGCCCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACTACTGACAAGCCTGCAGCTTCTTCCGGGCTTTCGGATGGATCAGGAGAGGATGAAATGTCTCCTCCAATGGGAAGCAGTGGTATGCGTCAATTTCAAGAGCAAAGAGGCCAACAAGATATGGATTATTCTTCCACCCCAACACTATGGAGTAATAATTCTTCAAGCAATAGGGACCCATGGCCACAAGCTAATTCAAACGACATAGATGGTTTCAGACCAATATCAATGTTTCAGTCTCAATCCATAGGCCATCAAATCCAGCAGGCGTGTGATTCAACCCAAATCAAGAGCAGTTTGTCAGGATCTAATAATAATTTAGAGTGCAAGAATCCAAGTTTGGAGTTCACATTAGGCAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1089 0.4729 MPLEGVFTSASASASTSCVPDLSLHISPPTTTSYAGGHHTDLSLGRREPPPPPPSLPTNMNHINEALRPIKGIPVYHNRSFPFLPMDRDHNNPNPKMCLYHHMPASSSPFPVGVGLDPISFLNSGGAGGPYNNRVAAVAAATSRFNNGIPSHQHHPLHHHYGSRFLSKLPSKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDEMSPPMGSSGMRQFQEQRGQQDMDYSSTPTLWSNNSSSNRDPWPQANSNDIDGFRPISMFQSQSIGHQIQQACDSTQIKSSLSGSNNNLECKNPSLEFTLGRPDWNGKGQA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4358 362 MobiDBLite consensus disorder prediction 259 303 - -
Amo13g4358 362 SUPERFAMILY Homeodomain-like 175 231 IPR009057 -
Amo13g4358 362 MobiDBLite consensus disorder prediction 233 303 - -
Amo13g4358 362 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 64 362 - -
Amo13g4358 362 Gene3D - 177 234 - -
Amo13g4358 362 MobiDBLite consensus disorder prediction 29 61 - -
Amo13g4358 362 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 178 231 IPR006447 GO:0003677
Amo13g4358 362 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 64 362 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4358 Amo-Chr13 139383523 139387576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4358 1 359 G2-like Transcription Factor Family AT5G16560 43.115 8.74e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo13g4358 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4358 - - adu:107481025 684.1