Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4315 ATGAAGGCAATACTCGTGGACATGTTTACGGCAGGTACGGACCCTACGTACACTGTGCTAGAATGGGCAATGGCGGAACTGTTAAAACGGCCAGCAATTATGCACAAACTTCAAGATGAAGTGAGAACTGTTGTTGGAAACAGAAGCAACATAACCGAACAAGATTTGGTTCACATGAACTACTTGAAAGCTGTGATCAAAGAAACACTTCGGTTGCACCCTTCACTTCCAGTTCTAGTTCCTAGAGAATCCACCAAAGGCATCAAGCTGAAAGGGTATGACATTGAAGCTGGAACACAGGTGTTGGTGAATGCATGGGCCGTTGCAACGGACCCAAAGTGTTGGGACCAGCCACTTGAGTTCAAGCCAGAGAGGTTCTTAAACAGTTCGGTGGATTTCAAAGGGCGTGATTTTCAGTTTATTCCTTTTGGTGCAGGAAGGAGAGGGTGCCCTGGGCTGCAGTTTGCCACTGCTCTTGATGAAACTGTGCTGGCTAACCTTGTTTATCATTTTGATTGGGATTTGCCTGCTGGTTCTAAGGAATTGGACTTGTCTAAATTTTATGGACTAGTCCTGCATTTGAAATCACCTCTCTTGGCTATACCAACCCCTTATTATGAATGA 624 0.4503 MKAILVDMFTAGTDPTYTVLEWAMAELLKRPAIMHKLQDEVRTVVGNRSNITEQDLVHMNYLKAVIKETLRLHPSLPVLVPRESTKGIKLKGYDIEAGTQVLVNAWAVATDPKCWDQPLEFKPERFLNSSVDFKGRDFQFIPFGAGRRGCPGLQFATALDETVLANLVYHFDWDLPAGSKELDLSKFYGLVLHLKSPLLAIPTPYYE* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4315 207 SUPERFAMILY Cytochrome P450 2 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 204 - -
Amo13g4315 207 PANTHER CYTOCHROME P450 71B11-RELATED 1 204 - -
Amo13g4315 207 PRINTS E-class P450 group I signature 63 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 PRINTS E-class P450 group I signature 20 46 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 PRINTS E-class P450 group I signature 104 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 PRINTS E-class P450 group I signature 140 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 PRINTS E-class P450 group I signature 150 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 Gene3D Cytochrome P450 1 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 PRINTS P450 superfamily signature 64 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 PRINTS P450 superfamily signature 11 28 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 PRINTS P450 superfamily signature 141 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 Pfam Cytochrome P450 2 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4315 207 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 143 152 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4315 Amo-Chr13 138639970 138649828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4315 1 205 Cytochrome P450 AT3G48280 51.442 3.83e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4315 - - adu:107474968 419.083