Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4298 ATGGCGAAGCAGAAGCAAGTCGCTCCTGAAGACTCTGACGACGAARCGCAGGTTCCCAGGCCTCAGCCCGAACAAGAAGATAGCAGCGAGGAAGAAGAAGCAGCAACTTCATCTGACGAGGACGAAGACACAGACCAAGGCGAAGATGAACGTGAGAAACACGTGCTGGTTCCCAGGAAGCCTCAACCGCAAAAGGTTTCCAAACCCTCGTCATCTTCTAAACTCTCTCCAATGTTGAAGTCTCAACCTTCGGCTTCTGTCAGTCAAACCAAATCCGGGTCAAAGCGCGCAGCTGAAAACGGTATCGACCACTCGGAGCAACCAAAACGTGTGAAGAAGGCACAGGAGGATGCGCAGAAATCCAAATCCCTCTTTCAGAGGGTTTTCAGCGAGGAAGATGAGATAGGGATCTTGAAAGGCCTGTCTGAGTTCATCGCGAAAACAGGGAAGGAACCCTATAAATGCGCTGATGAATTTTACGATTTTATGAAGGGGTCGAACTTGATTCGGGCAAATGTATCATGCATGCAAGTGAAGGAGAAGATCCGCCGGCTGAAGAAGAAGTTTGAAAACATCCTAATAAAAGAGAAGAACGGCAAGGGGACAACCTTAAAGCCGCASGAGTTGGAAGCACTTCAGTTGGGAAAGAATGTTTGGGGCCACGATGGCCGTGGCGGTGAAGCAGTTCTCAAGGAAACTGCGAAAAAGGATACAGTTAATAATGAGAAGGCTGCGAAGAAGGCGCTAGTGCCCCATTCAAAAGGAAAAGCTGAAGCAAAGTCCAAACTAAATTCTGAACCTTTGGATTCAAATGAAGGTAGAAGGATGAGTGAATTTTCTGTGACTAGTTTAGCTTTGACTTCAATGTTGAGGTACGATGGGACTTTTGGTAAGCCTTTCGGTGAAGATTATATTAGAAAGGGAATAGAGTTACTTGGAGTCTCAAAGAGGGAAGACATCGAGGCTAGGTGGAGGAAGTTCAAAGACGCTGAAAATAAATTGTATGTGGAGATAGCTGAATTCTATGCCGAACAGGCTAAGTTGATATATCAAGCAAATAGCTCGTCGTCCTCCTAG 1077 0.4624 MAKQKQVAPEDSDDEXQVPRPQPEQEDSSEEEEAATSSDEDEDTDQGEDEREKHVLVPRKPQPQKVSKPSSSSKLSPMLKSQPSASVSQTKSGSKRAAENGIDHSEQPKRVKKAQEDAQKSKSLFQRVFSEEDEIGILKGLSEFIAKTGKEPYKCADEFYDFMKGSNLIRANVSCMQVKEKIRRLKKKFENILIKEKNGKGTTLKPXELEALQLGKNVWGHDGRGGEAVLKETAKKDTVNNEKAAKKALVPHSKGKAEAKSKLNSEPLDSNEGRRMSEFSVTSLALTSMLRYDGTFGKPFGEDYIRKGIELLGVSKREDIEARWRKFKDAENKLYVEIAEFYAEQAKLIYQANSSSSS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4298 358 MobiDBLite consensus disorder prediction 64 96 - -
Amo13g4298 358 MobiDBLite consensus disorder prediction 26 47 - -
Amo13g4298 358 MobiDBLite consensus disorder prediction 1 25 - -
Amo13g4298 358 Pfam Protein of unknown function, DUF573 125 220 IPR007592 GO:0006355
Amo13g4298 358 MobiDBLite consensus disorder prediction 1 118 - -
Amo13g4298 358 PANTHER BNAANNG10740D PROTEIN-RELATED 13 353 IPR007592 GO:0006355
Amo13g4298 358 PANTHER STOREKEEPER PROTEIN 13 353 - -
Amo13g4298 358 Coils Coil 175 195 - -
Amo13g4298 358 MobiDBLite consensus disorder prediction 97 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4298 Amo-Chr13 138217658 138219916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4298 81 353 GeBP Transcription Factor Family AT1G61730 28.986 2.82e-20 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Amo13g4298 DUF573 5.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4298 - - adu:107458074 606.675