Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4282 ATGGAGGAGATTTCAACTTCAACTTCAGCTTCAGCTTCAGCATCAGGGTACAAGGAATATGTGGCAGGTTTGATCGCTGGCGTTGCCACTGTTGCCATTGGCCATCCATTTGACACCGTCAAGGTGAAACTGCAAAAGCACAACACAGGACAACATGTGGTTCGCTATAGAAGTGGATTGCATTGCACCACTAGGATACTGAAGACTGAAGGCATCAAAGGACTATATAGAGGAGCAACATCATCTTTTCTCGGGATGGCTTTTGAAAGTTCACTTCTTTTTGGCATATATTCCCAGACAAAATTGGCCCTTCAGGGAGGTGTTCAAAGTGGTGAACCGCAGCCTCAAGTGATAATACCATCTGCAGCTTATGGTGGTGCCATCATCAGTTTTGTGTTATGTCCGACGGAGCTGGTAAAGTGTAGGATGCAGATTCAAGGGACTGACTCTTTGGTTCCGAAGTCCAGTAGATACAGTAGTCCTCTTGATTGTGCCCTTAAAACCGTGAAAAGTGAAGGGGTGACAGGAATTTTTCGTGGAGGCTTTACAACATTGCTTAGAGAATCAATAGGGAATGCTGTCTTTTTCAGCACATATGAATACGTACGCTATCACCTGCATTCACATGCCAAAGCTGTTCGTTCCAATTACAATAACCTGGTTGATATTGGAATTGGGATTATTACCGGAGGTCTTGGTGGTGTGTCTTTTTGGTTGGCGGTTCTGCCCCTTGATGTGGCAAAGACTTTAATTCAGACAAACCCGGAAAAAAACTGTTCACGAAATCCTTTTCAGGTGCTGAGTTCGGTTTACAGGAGCGGTGGATTGAAGGGGTGTTATACAGGTCTGGGGCCTACAGTAACCCGAGCATTTCCTGCTAATGCAGCAGCAATTGTGACCTGGGAGCTAGCAATGAAAATGTTAGGCATTAGGCACGACTGA 942 0.4522 MEEISTSTSASASASGYKEYVAGLIAGVATVAIGHPFDTVKVKLQKHNTGQHVVRYRSGLHCTTRILKTEGIKGLYRGATSSFLGMAFESSLLFGIYSQTKLALQGGVQSGEPQPQVIIPSAAYGGAIISFVLCPTELVKCRMQIQGTDSLVPKSSRYSSPLDCALKTVKSEGVTGIFRGGFTTLLRESIGNAVFFSTYEYVRYHLHSHAKAVRSNYNNLVDIGIGIITGGLGGVSFWLAVLPLDVAKTLIQTNPEKNCSRNPFQVLSSVYRSGGLKGCYTGLGPTVTRAFPANAAAIVTWELAMKMLGIRHD* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4282 313 Pfam Mitochondrial carrier protein 227 308 IPR018108 -
Amo13g4282 313 Pfam Mitochondrial carrier protein 121 207 IPR018108 -
Amo13g4282 313 Pfam Mitochondrial carrier protein 17 105 IPR018108 -
Amo13g4282 313 Gene3D Mitochondrial carrier domain 3 122 IPR023395 -
Amo13g4282 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 307 IPR018108 -
Amo13g4282 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 205 IPR018108 -
Amo13g4282 313 Gene3D Mitochondrial carrier domain 123 313 IPR023395 -
Amo13g4282 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 103 IPR018108 -
Amo13g4282 313 SUPERFAMILY Mitochondrial carrier 16 302 IPR023395 -
Amo13g4282 313 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 13 140 - -
Amo13g4282 313 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 140 312 - -
Amo13g4282 313 PANTHER - 13 140 - -
Amo13g4282 313 PANTHER - 140 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4282 Amo-Chr13 137961978 137965596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4282 34 308 Antiporters AT1G79900 29.643 1.86e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4282 K15109 - qsu:112032455 496.123