Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4272 ATGGAGTCGCGAGTGTTGTCACGTGCCGCCACCTCCCTCCCTCACCTCCGCAGGCTACCGCGCCGTGAATCCGCCGCCAATGCATCCTTTGTGCCAGCTGTGAAGGCGACCGGCTCCGTGGCTGATGGTGGGAACCTCATATGGGGGAGACAGCTGCGCCCGGAGCTGTTGTCGCCGGTGCTGAAGAAAGAGGGGCCTGCCGTGCTTCTTCGGCCGTGTCTGGCCGCCGCCTCCTCGCCGGCCGAGGGGAGTGATTCCGCCGGGGAAGCGAAGGTTGGGTTCTTCGACAAGTACCCAGCACTTGTAACCGGGTTTTTCTTCTTCATGTGGTACTTCTTGAATGTGATTTTCAACATCCTCAACAAGAAGATCTACAATTACTTCCCCTACCCATACTTCGTGTCGGTTATTCATTTGTTCGTGGGTGTGGTGTACTGTTTGGTGAGCTGGACCGTGGGCCTTCCTAAGCGCGCTCCTATGGACTCGAACCTGCTCAAGTTGTTGATCCCTGTGGCCGTGTGTCACGCATTAGGCCACGTTACCAGCAATGTCTCATTTGCAGCGGTGGCTGTTTCGTTCACACATACCATTAAAGCTCTTGAGCCATTCTTCAATGCTGCTGCTTCACAGTTCATACTTGGCCAATCAATACCAATTACTCTCTGGCTCTCACTGGCTCCCGTTGTTATTGGTGTGTCAATGGCGTCATTGACCGAACTCTCATTCAACTGGACCGGATTCATCAGTGCAATGATTTCAAACATTTCCTTTACATACCGGAGTATCTATTCCAAGAAAGCCATGACTGATATGGACAGTACTAATATCTACGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCACCCGCTGTTATTCTGGAAGGGCCTGCACTGATGAAGCATGGATTCAATGATGCAATTGCTAAAGTAGGATTGGTCAAGTTCGTCTCAGACCTCTTCTGGGTTGGTATGTTTTATCACCTCTACAATCAGGTGGCCACCAACACACTGGAGAGAGTGGCACCTCTCACTCATGCAGTTGGCAACGTACTCAAACGTGTATTTGTTATTGGATTTTCAATCATTGTCTTTGGTAACAAGATTTCAACCCAAACTGGCATAGGAACATGCATTGCAATTGCTGGAGTTGCACTCTACTCGTTCATCAAAGCCAGGATGGAGGAAGAGAAGAGACAAGCAAAAGCAGCATAA 1218 0.5 MESRVLSRAATSLPHLRRLPRRESAANASFVPAVKATGSVADGGNLIWGRQLRPELLSPVLKKEGPAVLLRPCLAAASSPAEGSDSAGEAKVGFFDKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPMDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPAVILEGPALMKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSFIKARMEEEKRQAKAA* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4272 405 Pfam Triose-phosphate Transporter family 102 389 IPR004853 -
Amo13g4272 405 PANTHER SOLUTE CARRIER FAMILY 35 20 397 - -
Amo13g4272 405 PANTHER BNAC02G47130D PROTEIN 20 397 - -
Amo13g4272 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 238 - -
Amo13g4272 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 390 - -
Amo13g4272 405 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 101 399 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4272 Amo-Chr13 137803740 137807038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4272 1 403 Antiporters AT5G46110 78.102 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4272 K15283 - gmx:732611 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4272 13 137803740 137807038 Amo13g4272 13 137803740 137807038 ECH