Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4257 ATGGATTTGAGTGCTAACTCCAACGGCACTAGCAGCAGTGAAGAGAGTGAATTGTACCACGCACAGATCCACTTGTACAAGCATGTCTACAACTGGGTTAGCTCCATGGCTCTCAAGGCTGTTATGGAGTTAGGCGTTGCTGACGTCATCCACAACCACGGTAAACCCCTCACTCTCTCTCACTTAGCCTCTAAGCTCAACCTCCACCCTTCCAAAGTCGGCGCCCTCCACCGTTTCCTCCGCCTCCTAACACACAATGGTTTCTTCGCCAAGACCAAGCTTCTAGAAGGACAAGAAGAAGAAGACGCTTACGCTCTCACCCCTCCCTCCAAGCTTCTCATCAAGAGCAAACCAACGAATCTTTCGCCCGTCGTGAAGGGATCACTCCATTGGAGCTCCCTTAACATGTGGCACTCTTCCGAGAAGTGGTTCACTGAGGACAAGGAACAAACCATGCATGAGACCTCTTCTGGAGGACAGAGCTTCTGGGATTTTCTCAACAACAACCCTGACTGCATCGCCATGTTCCAGGACGCCATGGCTGCTGATTCATACATGTTCAAGATTGCGCTCAAGGAGTGCAGGCACGTGTTTGAGAATCTCGGCTCCATTGTTGATGTTGGTGGTGGTACTGGTGGTGTCTCCAAGCTTATTCATCAAGAGTTTCCGCAGTTGAAGTGCACCGTTTTCGACCAGCCGGAGGTTGTTGGTAACCTCAAAGGAGATGGGAATTTGAACTTTGTTGCCGGTGACATGTTCAAATCGATCCCTTCTGCTGATGCAGTCTTACTCAAGTGGATTTTACATGACTGGAATGATGAGCAGGCCTTGAAGATATTGAAGAACAGCAAGGAAGCTATTTCGGAAAGAGGGAAAGAAGGGAAGGTGATAATCATAGACATATCCATCGATGAAACCAGCGATGATAAGGAATTGATTGAGCTGAAACTGGATTATGATTTGGTGATGTTGGCAATGTTCAATGGAAAGGAAAGAGAGAAGAAGGAATGGGACAAGCTCATCCATGAAGCAGGCTACAGTAGATACACCATTACCCCAATTTGTGGCTTCAAATCTCTTATTGAAGTTTACCCTTGA 1098 0.4745 MDLSANSNGTSSSEESELYHAQIHLYKHVYNWVSSMALKAVMELGVADVIHNHGKPLTLSHLASKLNLHPSKVGALHRFLRLLTHNGFFAKTKLLEGQEEEDAYALTPPSKLLIKSKPTNLSPVVKGSLHWSSLNMWHSSEKWFTEDKEQTMHETSSGGQSFWDFLNNNPDCIAMFQDAMAADSYMFKIALKECRHVFENLGSIVDVGGGTGGVSKLIHQEFPQLKCTVFDQPEVVGNLKGDGNLNFVAGDMFKSIPSADAVLLKWILHDWNDEQALKILKNSKEAISERGKEGKVIIIDISIDETSDDKELIELKLDYDLVMLAMFNGKEREKKEWDKLIHEAGYSRYTITPICGFKSLIEVYP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4257 365 PANTHER O-METHYLTRANSFERASE 10 365 IPR016461 GO:0008168
Amo13g4257 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Amo13g4257 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 117 IPR036390 -
Amo13g4257 365 Pfam O-methyltransferase domain 137 347 IPR001077 GO:0008171
Amo13g4257 365 Gene3D - 7 113 IPR036388 -
Amo13g4257 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 365 IPR016461 GO:0008168
Amo13g4257 365 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 10 365 - -
Amo13g4257 365 Pfam Dimerisation domain 36 84 IPR012967 GO:0046983
Amo13g4257 365 Gene3D Vaccinia Virus protein VP39 115 365 IPR029063 -
Amo13g4257 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 364 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4257 Amo-Chr13 137548348 137550289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4257 33 346 Monolignol Biosynthesis Gene Families AT5G54160 32.500 2.63e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4257 K22588 - ag:AAY18581 530.791