Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4253 ATGAAGAAGGTTTCCAAGACCAGCTGCAAGTCTGTATCACACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTTGATGACCTGCAGCTGATGTTCTTAGATCTGCAGTTCGCAAGGAAGGAGAGCCGTACAGTCGATGCGGCTGTCCTTGAGGAGCAAGTTCATCAGATGCTTCGTGAGTGGAAGGCTGAGCTCAACGAGCCCTCGCCTGCTTCTTCTTTGCAGCAAGGTGGCAGTCTTGGGTCATTCTCCACAGATATCTGTCGATTGTTGCAGCTTTGTGAGGAGGAAGATGATGCATCTAGTCCATTAGCTGCCCCTAAGCCTGAACCTAATGATCAGACGCAGCAGATTGGGGCTAAGGTTGTATTCCAAGAGGGTCAGCAGCAACATGATTTCCCATTGGTTGATGAGCGCAAACACTCCATCTCAGGAGTTCAAAATGTGGCAGCTAACAACCTGGAAGGACCTGCTTTAGAATATCACCAGTTTGATTTGCATCAGGACTTTGATCACAGTTTCTATACTGGTTTTAATGGCATAGGTTATTGTGAGGAGGATGCTATTCCTCAAATATCTAGCTACCTGCCAAGTATCTGCCCTCCGCCTTCTGCTTTCTTGGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTACTGCAGTAGCTTTCATGCTGCTCTAGCCTTGAATGAAGGGCCACCAGGTATGTCCCCAGTTCTACGACCAGGGGGCATCGGTTTGAAAGATAATTTACTTTTTGCCGCTCTTAGTGCAAGGGCACAAGGAAAAGATGTTGGCATCCCAGAATGCGAGGGAGCAGCAACTGCGAAGTCTCCATGGAACGCACCAGAGCTCTTTGATCTTTCTGTTCTCGAGGGTGAGACTATCAGGGAGTGGCTCTTCTTCGACAAACCTCGAAGGGCGTTTGAGAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTATAGCGGACGTGGTTGGCATGAATCTCGAAAGCAAGTGATGAATGAATTTGGAGGTCTGAAGAGATCCTATTATATGGACCCGCAACCACTGAACCATTTTGAATGGCACCTCTATGAATATGAGATTAGCAAGTGTGATGCATGTGCTTTATATCGGTTGGAACTAAAGCTTGTTGATGGGAAGAAGAACTCTAAGGCAAAGGTTACCAATGATTCAGTTGCTGATTTGCAGAAGCAGATGGGACGGCTTTCTGCTGAGTTCATGTCTGATAACAAAAGGCCTGCAAAAGGCAGAGCTAAACTTAATGCCAAGGTTGGCTTAGGTGGTGTCTATTCCTCTTCAGGCAGAGTGGCTCCACTAAATGGAACATATGATTATGGTTTAGCTGCACCATATGACTATCTTGTTGATAACATGGGCGACTACTATGGAACATGA 1434 0.4707 MKKVSKTSCKSVSHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQTQQIGAKVVFQEGQQQHDFPLVDERKHSISGVQNVAANNLEGPALEYHQFDLHQDFDHSFYTGFNGIGYCEEDAIPQISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMSPVLRPGGIGLKDNLLFAALSARAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKVTNDSVADLQKQMGRLSAEFMSDNKRPAKGRAKLNAKVGLGGVYSSSGRVAPLNGTYDYGLAAPYDYLVDNMGDYYGT* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4253 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 IPR039277 GO:0006355|GO:0048578
Amo13g4253 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4253 Amo-Chr13 137471210 137475018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4253 3 475 VOZ-9 Transcription Factor Family AT1G28520 70.672 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Amo13g4253 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4253 - - gmx:100798565 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4253 13 137471210 137475018 Amo13g4253 13 137471210 137475018 ECH