Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4251 ATGGGTTCAGGCCATTGGTTTAAGACAATCATTCGATTAAGAAAATCAAAACAAAGCAGATCAAAGAAATCAAAGGTACAGCACACTTTGTCTTCATTGAAGATAAACAATAATACAGAAAGAGAGTCTAGTGGTTCAGCAAATGGAACTAGTACTGCAAGTGAAAATCTTGTGTCCTCTGGGGTACCACTTGAAACTATTGCTGCAACAAGAATACAGATGGCATTCCGGGCATACAAGGCTAGAAAATCTTTAGGCCGATTAAAAGGATTGGCAAAGCTAAAGATTCTGACAGAAGGTTACTCTGTTAGAAAACAAGCTACTACAGCCATAAATTATCTTCACTCATGGAGTAAGATACAGACAGATATTAGAGCTCGCCGAATCTGTATGGTGACAGAAGACAGGATCAGGCGGAAGAAACTGGATTCACAGCTAAAGCTTGAAGCAAAGCTCCATGATCTGGAGGTAACCTTCCCATACATTGTGATACTCTCTTCTCTGATTCATAGGTGGATTGGTGTGGAGGCCCTGAAACCATGGAGGAAATCGTTGCAAGGCTACATCAGAGAGAAGAAGCAGCAGGCCAACTGTAGTCAGAGTCAAGGGCTAGGCAGTTATGAACTTGGCAAAGCTAACTGGGGTTGGAGCTGGAAGGAGTGCTGGATTGCGGCTCGCCCGTGGGAAAGCCGCATCCCCAACCTAACCGTGAGTCCCAAGAAAGCTCAAAATAAGTACTCAAGCCAAGGTCAGAAGGATAAGAACACATTGACACCAAATGGACAAGTTTCAGTTAAAGCTCCTTCACCTAATGTAAAAGGCACTCCTCCTTCTTTAGCAGCTAGCGCACACATGGTTTCCATTCTGAGAGCGTTATTATCAACACCGTTATTATTACCCAGAGCATCTCTCTCCAGATTCATGGATTCTTCTTCTTCTTCTTGTTCTTCCAACTTCCACGAAGGAGGATCCCAGAAGCTTCGGGCTTTGGCGCAGCAGCTCCGATTCTACAAGCCACCGCCTTTTTCGGAGGAGGTTGACGAACAAAGCAATGAAGAAGAGTGTGGGAGCGGTAAGGTTGTTTCCCAAGTGGGATTTCCTGAATCGGCCACACCAGTGGCTCAGAACCCTGAAAAGTTCAGACCAAAGAGAGCTGCTGTTTTGATCTGCCTCTTTGAAGGGGATGCCGGTGATCTTAGGGTTATACTCACTAAGCGCTCTTCTAAGCTCTCCTCTCACTCCGGTGAAGTGGCTTTGCCCGGTGGGAAAGCAGAGGAAGGGGATAAGGATGATGGGGACACTGCAAAGAGAGAGGCAAAGGAGGAAATTGGGTTGGACCCTGAACTTGTCAATGTTGTTACTGTTCTTGAACCATTCTTGTCTAAGCACCTCCTCAGAGTGGTTCCAGTCATTGGCATACTTCATGACAAGAAAGCATTCAAACCGGTTCTAAATCCTGCAGAAGTGGACGCAGTATTTGATGCACCTCTGGAAATGTTTCTGAAGGATGAAAATCGGAATCAGGAGGAGAGGGAGTGGATGGGAGAGAAGTATTTGATACATTACTTCGACTATGAAACTGAGCATACAAACTACCTCATATGGGGTTTAACTGCTGGTATATTGATTAGGGCTGCGTCAGTTGTGTACAAACGGGAACCAGCTTTCATGGAGCAGAATCCTAAATTCAAAGTTCCAAAGGTTTTAACTAAGGATACTGTAATGCGTTGA 1731 0.4495 MGSGHWFKTIIRLRKSKQSRSKKSKVQHTLSSLKINNNTERESSGSANGTSTASENLVSSGVPLETIAATRIQMAFRAYKARKSLGRLKGLAKLKILTEGYSVRKQATTAINYLHSWSKIQTDIRARRICMVTEDRIRRKKLDSQLKLEAKLHDLEVTFPYIVILSSLIHRWIGVEALKPWRKSLQGYIREKKQQANCSQSQGLGSYELGKANWGWSWKECWIAARPWESRIPNLTVSPKKAQNKYSSQGQKDKNTLTPNGQVSVKAPSPNVKGTPPSLAASAHMVSILRALLSTPLLLPRASLSRFMDSSSSSCSSNFHEGGSQKLRALAQQLRFYKPPPFSEEVDEQSNEEECGSGKVVSQVGFPESATPVAQNPEKFRPKRAAVLICLFEGDAGDLRVILTKRSSKLSSHSGEVALPGGKAEEGDKDDGDTAKREAKEEIGLDPELVNVVTVLEPFLSKHLLRVVPVIGILHDKKAFKPVLNPAEVDAVFDAPLEMFLKDENRNQEEREWMGEKYLIHYFDYETEHTNYLIWGLTAGILIRAASVVYKREPAFMEQNPKFKVPKVLTKDTVMR* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4251 576 ProSiteProfiles Nudix hydrolase domain profile. 382 538 IPR000086 -
Amo13g4251 576 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 317 378 - -
Amo13g4251 576 PANTHER NUDIX HYDROLASE 380 562 IPR045121 GO:0010945
Amo13g4251 576 Pfam NUDIX domain 383 502 IPR000086 -
Amo13g4251 576 CDD CoAse 383 543 IPR045121 GO:0010945
Amo13g4251 576 ProSiteProfiles IQ motif profile. 65 93 IPR000048 GO:0005515
Amo13g4251 576 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 368 547 - -
Amo13g4251 576 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 380 562 - -
Amo13g4251 576 MobiDBLite consensus disorder prediction 412 440 - -
Amo13g4251 576 MobiDBLite consensus disorder prediction 15 56 - -
Amo13g4251 576 SUPERFAMILY Nudix 378 542 IPR015797 -
Amo13g4251 576 PANTHER NUDIX HYDROLASE 317 378 IPR045121 GO:0010945
Amo13g4251 576 MobiDBLite consensus disorder prediction 25 56 - -
Amo13g4251 576 MobiDBLite consensus disorder prediction 240 271 - -
Amo13g4251 576 MobiDBLite consensus disorder prediction 422 440 - -
Amo13g4251 576 MobiDBLite consensus disorder prediction 240 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4251 Amo-Chr13 137449094 137453244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4251 1 275 IQD Protein Family AT2G33990 42.500 5.42e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4251 - - gmx:100802086 420.624