Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4246 ATGCCTGTCCCTAAATATTCTACTGCTTGTTCCTTCTTCTCATCTCAATTCACTTGTTTGTTTGTTTTCTTCATCATTGTAGCTGGAACTACTACACCATGCTTAGCCAAAATTATTACCAACAACACCACCCGCCGCCATCGTCAGGTCTCAGTTGATTACTATGCAAGAACTTGTCCCAATGTAGAACAGCTTGTAGGGTCAGTCACCAACCAACAATTCAAAGAATCACCTGTTTCTGGACCTGCCACCATTAACCTCTTCTTCCATGATTGTTTTGTAGAAGGGTGTGATGGATCTATTCTAATAGCATCAAAGCAAGGAAGCAAAGAATTGGCAGAGAAAGATGCAGAGGTTAATAGAGAATTGAGAGTGGAAGGTTTTGAGACCGTGATGAAGGCTAAGGAAGCAGTGGAGAGAAAATGTCCTGGTGTAGTTTCATGTGCAGACATTCTTGCAATTGCTGCAAGAGATTATGTGCACTTGGCAGGGGGACCATACTACCAAGTGAAGAAGGGAAGATGGGATGGGAGGATATCAATGGCATCAAGGGTGGAACCCAACATCCCTCATGCAAACTACACCGTTGATCAGCTCATCAAGCTCTTCAACTCAAAAGGCTTAACCATACAAGACATGGTTGCTCTCTCTGGTGCCCACTCAATAGGTTTTGCACACTGCAAGCACTTTGTGAAAAGGCTATACAATTACAAGGGCAACGGTCAACCAGACCCAAACGTTGACCCCAAACTCCTCAATGCACTGAGAATGTATTGCCCTAACTATGGTGGAAACTTGGACATTGTTGCCCCATTTGATGCAACTACACCATTTGTATTTGACCAAGCATATTATGGTAACTTGCAGAAGAAGATGGGGTTGTTAGCTTCCGACCAGGCTTTGGTTTTGGACCCAAGAACCAAGCCTTTGGTTCAGGAGTTTGCAAATGATAAGAACAAGTTTTTTCAAGCTTTTGCAGCTGCCATGGATAGACTGAGTTTGGTGGGAGTGAAGAGAGGGAAAAAGCATGGAGAGAAGAGAAGAGACTGCAGCATGCATGCATGA 1065 0.4385 MPVPKYSTACSFFSSQFTCLFVFFIIVAGTTTPCLAKIITNNTTRRHRQVSVDYYARTCPNVEQLVGSVTNQQFKESPVSGPATINLFFHDCFVEGCDGSILIASKQGSKELAEKDAEVNRELRVEGFETVMKAKEAVERKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGRISMASRVEPNIPHANYTVDQLIKLFNSKGLTIQDMVALSGAHSIGFAHCKHFVKRLYNYKGNGQPDPNVDPKLLNALRMYCPNYGGNLDIVAPFDATTPFVFDQAYYGNLQKKMGLLASDQALVLDPRTKPLVQEFANDKNKFFQAFAAAMDRLSLVGVKRGKKHGEKRRDCSMHA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4246 354 Pfam Peroxidase 70 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 CDD secretory_peroxidase 49 351 IPR033905 GO:0004601|GO:0042744
Amo13g4246 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 212 222 IPR019793 -
Amo13g4246 354 SUPERFAMILY Heme-dependent peroxidases 49 352 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PANTHER PEROXIDASE 19 37 350 - -
Amo13g4246 354 Gene3D Peroxidase, domain 2 190 332 - -
Amo13g4246 354 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Plant peroxidase signature 271 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Plant peroxidase signature 287 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Plant peroxidase signature 327 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 ProSiteProfiles Plant heme peroxidase family profile. 49 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 Gene3D - 53 352 - -
Amo13g4246 354 PANTHER PEROXIDASE 25-RELATED 37 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g4246 354 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4246 Amo-Chr13 137358640 137361845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4246 13 350 Peroxidase AT2G34060 61.538 2.91e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4246 K00430 - gmx:100777463 542.732