Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4242 CAACTTCTTGCGTGTAAAAGAGAAAAAAGAGCAACAATGTTTTTTCAACTTGCACTTACTTTCTTAGTGATAACACTTTTTATGTACCTTCGTCCTACTCCAACAGCAAAATCTAAAGCCCTCCGTCACCTCCCAAACCCTCCGAGTCCGAAGCCCCGCCTCCCCTTAGTGGGACACCTCCACCTCTTGGACCCTCTCATCCACCACTCTCTCATCCATCTCTCCAAGCGCCATGGTCCCATTTTCTCACTCTACTTTGGCTCTTTGCCCACCGTAGTCGCCTCTTCTCCTGAACTTTTCAAGCTCTTCCTCCAAACCCACGAAGCCACTTCTTTCAACACTAGGTTCCAAACCTCTGCCATCCGCCGTCTAACGTACGACAACTCCGTCGCCATGGTACCTTTCGGACCTTACTGGAAGTTCATAAGAAAGCTCATCATGAACGATCTCCTCAACGCCACCACAGTTGCGAAGCTCAGACCCCTCAGGAGCCAAGAGATTAAGAAAGTTCTCAAAGTTCTTGCACAGAATACGGAAGCTCAAACACCCGTCGACATCACCGAGGAGCTTCTGAAATGGACCAACAGCACCATCTCCAAGATGATGCTTGGGGAGGCAGAGGAGATCAGACACATTGCCCGCGAACTTCTCAAGATTTTCGGCGAGTACAGCCTCTCCGACTTCATCTGGCCCTTAAAAAAACTCAAAGTTGGCCAGTACGAAAAGAGGATCGACAACATCTTGGGCATGTATGACCCCGTAGTTGAGAGAGTCATCAAGAAACGTCAGGAGATCAGAAGGAGGAGGAAGGAGAAGAATGGCGAGCTCGAAGAAGGCGAACAGAGCGTGGTCTTCCTCGACACCTTGCTTGATTTTGCAGAGGATGAAACCATGGAGATCAAGATCACCAAGGAACAAATCAAGGCTCTCGTCGTCGATTTCTTTTCTGCAGGAACAGATTCGACAGCGGTTGCAACAGACTGGGCGTTGGCAGAGCTGATAAACAACCCAAGGGTTCTTGCAAAGGCCCGTGAAGAAGTGTACAACGTGGTTGGGAAAGACAGGCTTGTAGAAGAAACAGACATACAGAACCTTCCATACATCAGAGCCATTGTGAAAGAGACGTTCCGCATGCACCCGCCACTCCCAGTCGTGAAGAGGAAGTGCGTGGCAGAGTGCGAAGTGGACGGTTATGTCATCCCAGAGGGAGCTCTCATACTCTTCAACGTCTGGGCCGTGCAAAGAGACCCTAAGTATTGGGAAAGCCCGCTGGAGTTCAAGCCCGAGAGGTTCTTGGAGAACCCCACAGAAGCAGGGGAGGCCGGGGCCGTTGACCTCAGGGGCCAACACTTCACGCTGTTGCCGTTTGGATCAGGGAGGAGAATGTGCCCGGGTGTCAACTTGGCCACTGCTGGAATGGCAACCCTGCTTGCTTCGCTCATTCAGAACTTCGACCTGCAGGTTGTGGGCCCTAACGGAAAGCCCCTCAAGGGTAAGGATAACAGGGCCAGCATGGAGGAGAGGCCCGGGCTTACTGTCCCAAGGGCCCACAACCTTGTGTGTGTTCCGGTTGCTAGGTCCACCGCAATAACAAAGCTCCTTTCCTCGTAA 1611 0.5164 QLLACKREKRATMFFQLALTFLVITLFMYLRPTPTAKSKALRHLPNPPSPKPRLPLVGHLHLLDPLIHHSLIHLSKRHGPIFSLYFGSLPTVVASSPELFKLFLQTHEATSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVAKLRPLRSQEIKKVLKVLAQNTEAQTPVDITEELLKWTNSTISKMMLGEAEEIRHIARELLKIFGEYSLSDFIWPLKKLKVGQYEKRIDNILGMYDPVVERVIKKRQEIRRRRKEKNGELEEGEQSVVFLDTLLDFAEDETMEIKITKEQIKALVVDFFSAGTDSTAVATDWALAELINNPRVLAKAREEVYNVVGKDRLVEETDIQNLPYIRAIVKETFRMHPPLPVVKRKCVAECEVDGYVIPEGALILFNVWAVQRDPKYWESPLEFKPERFLENPTEAGEAGAVDLRGQHFTLLPFGSGRRMCPGVNLATAGMATLLASLIQNFDLQVVGPNGKPLKGKDNRASMEERPGLTVPRAHNLVCVPVARSTAITKLLSS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4242 536 Gene3D Cytochrome P450 36 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 Coils Coil 255 282 - -
Amo13g4242 536 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 527 - -
Amo13g4242 536 PANTHER 2-HYDROXYISOFLAVANONE SYNTHASE 15 527 - -
Amo13g4242 536 Pfam Cytochrome P450 48 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 SUPERFAMILY Cytochrome P450 41 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4242 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4242 Amo-Chr13 137291055 137293203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4242 44 526 Cytochrome P450 AT5G06900 37.045 1.17e-110 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4242 K23179 - ag:BAA76380 866.685