Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4202 ATGGCTGGTATTTGCTGTGGTGTTGTTGGAGAAGGCGAACCAACGGCTCCAATCGAGCCAAATCCACGCCCATCCAGGCGAAGGAGCCTAGACTTGCTTTCTTTGAGGTTAATGACCGACGTGGCGACGGCGGCGGCGCCCGAGGCTTCCCGGAAACGGCAGAGGATGGATCTTTGCGCGGTTCCCAGGGAGTGCGGCAACGTCGCGAAGAACCGCGGTTCCTTTGTTGTCGGGCAGAACAAGGAGGACGGATCTAAGCAGCTGGTTAACAACGAAGATGGCACAGTTTCGGAAACGAAACGGTCCAAGGTTTCTTCTCTGTTGGGTTCGACGGCGGGAGGTTTGGGAAATGAGAAGGTTTATGGAGAGTGTCCGAAGTTCGGCGTGACTTCCGTTTGCGGAAGGAGACGAGACATGGAGGATTCGGTTACTGTGCGTCCTTCTTTCTGTGATGAGAGTTACAGAGGGTTCCATTACTTCGGCGTGTTTGACGGTCACGGTTGCTCACATGTTGCGACGCTGTGCAAGGAGAGGCTGCATGATATTGTGAAGGATGAAATCAGTGGAGCGAAGAAGGATGAAGAAGAGTTGGAATGGAAATCCGTGATGAAGCATGGGTTCTTGCGCATGGACGACGACGTACACACCTGGAGCAAGGGGAATCACTCCTCCACCTGCCGCTGCGAGCTTCAGAGTCCACACTGCGACGCTGTCGGATCCACTGCCGCTGTCGCCGTCGTCACCTCCGAGAAGATCGTTGTCTCCAACTGCGGCGACTCACGTGCAGTGCTCTGCCGCAACGGCGTGGCCATCCCCCTGTCCTCCGATCACAAGCCTGACCGACCCGACGAACTGATCCGGGTTCAAGCTGCAGGAGGGCGCGTGATCTATTGGGATGTTCCCAGGGTGCTTGGGATGCTAGCCATGTCTAGAGCCATAGGGGATAATTATCTGAAACCGTACGTGATCCCGGAACCGGAGGTGACCGTTACTGAGAGGAGACACGATGATGAGTGTTTGATTATTGCGAGTGACGGTTTGTGGGACGTGGTGTCAAATGACACTGCGTGCGGGGTGGTGCGGATGTGTCTCAAGGCGCAGAAGCCGCCGTCGCCGCCGGGGTCTCCGTCGGGGAGTGGCGTGGCAGCGGACGGATCCGATAGGGCGTGCTCAGATGCTTCCATTCTGCTGACGAAGTTGGCGCTGGCGAGGCACAGCGAGGATAATGTGAGCGTGGTGGTAGTTGACTTGAGGAGGGGCCAACAACGGACTAATCCCAACAATAACGACAACGTTAATTGA 1302 0.5637 MAGICCGVVGEGEPTAPIEPNPRPSRRRSLDLLSLRLMTDVATAAAPEASRKRQRMDLCAVPRECGNVAKNRGSFVVGQNKEDGSKQLVNNEDGTVSETKRSKVSSLLGSTAGGLGNEKVYGECPKFGVTSVCGRRRDMEDSVTVRPSFCDESYRGFHYFGVFDGHGCSHVATLCKERLHDIVKDEISGAKKDEEELEWKSVMKHGFLRMDDDVHTWSKGNHSSTCRCELQSPHCDAVGSTAAVAVVTSEKIVVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELIRVQAAGGRVIYWDVPRVLGMLAMSRAIGDNYLKPYVIPEPEVTVTERRHDDECLIIASDGLWDVVSNDTACGVVRMCLKAQKPPSPPGSPSGSGVAADGSDRACSDASILLTKLALARHSEDNVSVVVVDLRRGQQRTNPNNNDNVN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4202 433 CDD PP2Cc 126 417 IPR001932 -
Amo13g4202 433 PANTHER PROTEIN PHOSPHATASE 2C 37 70 421 - -
Amo13g4202 433 Gene3D - 121 425 IPR036457 -
Amo13g4202 433 ProSiteProfiles PPM-type phosphatase domain profile. 126 417 IPR001932 -
Amo13g4202 433 ProSitePatterns PPM-type phosphatase domain signature. 159 167 IPR000222 GO:0043169
Amo13g4202 433 Pfam Protein phosphatase 2C 127 409 IPR001932 -
Amo13g4202 433 SUPERFAMILY PP2C-like 124 418 IPR036457 -
Amo13g4202 433 SMART PP2C_4 114 415 IPR001932 -
Amo13g4202 433 PANTHER ALPHABET, ISOFORM E-RELATED 70 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4202 Amo-Chr13 136470303 136472598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4202 1 392 PP2C-type Phosphatase Gene Family AT3G11410 54.613 1.77e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4202 K14497 - gmx:100796161 517.309