Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4195 ATGGAGGAAACACATCATGATGGTACTGATCAGGATCAGTACTCGATGTGGATGAAGAGAAAAGAAATCTTGAAGTCGCATATTCAAGTAGCACCCTTTGGAATAAGCGGCAATAATTCATCATCATCATCATGGGAAGAAAGGGCATTTGCTGAAGATGCAGCAAGGATTCTAGGTGGATGCATATGGCCGCCAAGATCATACTCATGCAGCTTCTGCAAAAGAGAGTTCAGGTCTGCTCAAGCTCTTGGGGGACACATGAATGTTCATAGGAGGGACAGAGCTAGGCTCAAACGAAGCCTTAGCCCTCATAATCATCATCATCATGGCAAAAATGATTGTAAGTCATCATTATTATTAGGTACTTCTCATCATCACCATCATCAATCTTCCGGTGAGAATTACTATCAGTACTACTCTAGTAGCTTTATTGGAACTACTGATAATAATTATAAAGCTATGAGTAGCAGCAAACCTTCATCGTCTGATTCAGAACCAAAAGAAGGAAAAGTCAATGCAATAATAAGTAGTTATTGTAATGATGGTGATTATGTTGAAACAAGTTTGTGTGTGGGGTATAATAATTCATCGTCATCATTATGTGGGAACGAAGAATCTTATTGTAAAAGGCCTAAGAGGACAAATTCTTCAATGTTTTCTTCGTTTCTGAAGCCATGTTCAAATGATAGAAGGCTGCAGGTGACTTTATTGCAGTCTGCAGAATCATTTGCAGTACCTACTGGAACTGAAATGGAAGATTTGGATCTTGAACTCAGGCTGGGGAAACCGCAGAAAATTTAG 801 0.3933 MEETHHDGTDQDQYSMWMKRKEILKSHIQVAPFGISGNNSSSSSWEERAFAEDAARILGGCIWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKRSLSPHNHHHHGKNDCKSSLLLGTSHHHHHQSSGENYYQYYSSSFIGTTDNNYKAMSSSKPSSSDSEPKEGKVNAIISSYCNDGDYVETSLCVGYNNSSSSLCGNEESYCKRPKRTNSSMFSSFLKPCSNDRRLQVTLLQSAESFAVPTGTEMEDLDLELRLGKPQKI* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4195 266 Pfam C2H2-type zinc finger 68 92 - -
Amo13g4195 266 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Amo13g4195 266 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 265 - -
Amo13g4195 266 SUPERFAMILY beta-beta-alpha zinc fingers 65 95 IPR036236 -
Amo13g4195 266 PANTHER OS07G0101800 PROTEIN 11 265 - -
Amo13g4195 266 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Amo13g4195 266 SMART c2h2final6 68 90 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4195 Amo-Chr13 136281064 136282194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4195 33 100 C2H2 Transcription Factor Family AT2G37740 69.118 5.49e-27 104