Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4193 ATGGCGAATCGATGGTGGGCTGGGAATAATGTGGCTATGAGGGCAACCGACTCAATCTCAGCGTCCCCATCAGTGCACCTGAGAAGAGAACAGGAGTTCCTCGACACTCCCACCAACAACAACAACACTCCAACAAACAGCAGCAATAGTAACACCAACCCCAACACCGAAGAAGACGAGAGCAGAGACACCGGTGCCGCTGCTGGAGCAAGAGGAGACGACAACAACCCTGCAGACCCGGCAAGTGGACCAGGAACCAGCGGAAAAAGGCCACGTGGCAGGCCTCCGGGATCTAAGAACAAGCCTAAACCCCCAGTTGTCATTACCAAAGAGAGCCCCAACGCACTCCGCAGTCATGTTCTTGAGATCAGCAGCGGCTCCGACGTCGCTGAAAGTATCGCCACCTTCGCCAACCGCCGCCATCGAGGTGTGTCGGTCCTCAGTGGAAGCGGCATTGTTGCAAACGTCACGCTCCGCCAACCCGCTGCTCCCGGTGGCGTCATCACTCTCCATGGAAGGTTCGAGATACTCTCACTCAACGGCGCTTTCCTGCCCGCTCCTTCTCCTCCCGGGGCCACCGGACTCACCGTTTACCTGTCCGGCGGTCAGGGGCAGGTGGTTGGCGGAACTGTTGTGGGTTCCTTGGTGGCTTCGGGCCCTGTAATGGTGATTGCCGCAACCTTTGCCAATGCTACTTATGAACGGTTACCGCTTGTGGAAGATGAACAAGTTGAAGAAGAAATGCAAGTGCAGCAGCAACATTCAGGAGGAGTGAGTGGTGGCGGTGGCGGTGCTGCTGCTGCTGGTGGTGGCAGTGGAGGAGGTTCTTCTTCTCAAGGGGGTGGTTTGGGTGAGGGTGGTGGTTCTGTGGGGATGTACAATTTGCCACCGAATTTGATGCACAATGGTCAATTGGCAGCACATGATGTTTTCTGGGGACCTCCACCGCCTCGTCCTCCGCAGCCTCCATCTTTCTAA 978 0.5665 MANRWWAGNNVAMRATDSISASPSVHLRREQEFLDTPTNNNNTPTNSSNSNTNPNTEEDESRDTGAAAGARGDDNNPADPASGPGTSGKRPRGRPPGSKNKPKPPVVITKESPNALRSHVLEISSGSDVAESIATFANRRHRGVSVLSGSGIVANVTLRQPAAPGGVITLHGRFEILSLNGAFLPAPSPPGATGLTVYLSGGQGQVVGGTVVGSLVASGPVMVIAATFANATYERLPLVEDEQVEEEMQVQQQHSGGVSGGGGGAAAAGGGSGGGSSSQGGGLGEGGGSVGMYNLPPNLMHNGQLAAHDVFWGPPPPRPPQPPSF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4193 325 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 238 - -
Amo13g4193 325 MobiDBLite consensus disorder prediction 306 325 - -
Amo13g4193 325 Gene3D - 116 255 - -
Amo13g4193 325 MobiDBLite consensus disorder prediction 34 55 - -
Amo13g4193 325 PIRSF ESCAROLA 28 325 IPR014476 GO:0003680
Amo13g4193 325 CDD DUF296 117 200 IPR005175 -
Amo13g4193 325 MobiDBLite consensus disorder prediction 16 113 - -
Amo13g4193 325 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 320 IPR014476 GO:0003680
Amo13g4193 325 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 320 - -
Amo13g4193 325 MobiDBLite consensus disorder prediction 243 298 - -
Amo13g4193 325 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 229 IPR005175 -
Amo13g4193 325 ProSiteProfiles PPC domain profile profile. 113 252 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4193 Amo-Chr13 136259692 136262240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4193 1 325 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.143 9.13e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4193 - - qsu:112039774 333.183