Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4190 ATGAAAAAGAAATTCAACCCTCCTATTATGGCAAAAACACTGCTGCTTCTTTTTTTCCTCTCAGCTCTGACCTCAAGGATTACTCACCAACAAGAGATCTTCTTTGAAGGCTTCAATGGTGGTGAAGCCGCCGCAAACATGTCCCTAAACGGTGGCGCAGTTATTTACCAAAGCGGCACACTTGGTTTAACAAACGACACTCAGAAGGTAGTTGGTCACGCGTTTTACTCGACCCCAATCCAATTCAAGAACAAGAGCAAAGTTGTCTCCTTTTCCACCGCATTTGCATTCGCAATAGTCCCTCAGTACCCAACACTCGGTGGCCATGGCTTCGCCTTCACCATTGCTCCCTCCAAGGACCTTCCCAACGGTTACCCAAGCCAGTACTTGGGCCTCCTCGGCCCAAAAAACCTCGGCAACTTCTCCAACCACCTCTTCGCGGTGGAGTTTGACACCGTTCAAGACTTCGAGTTCGGAGACATCAGTGACAATCACGTGGGCGTTAACCTCAACAACATGGCCTCCAACAAATCCGTTAAAGCAACCGTTTTGGGACAAGAAGAGCTGAACTTGAAGAGTGGCAAAGTGATTCAAGCATGGGTTGATTATGACTCCTCAAAGAACCAATTGGAGGTTCGTCTCTCCCAAACCTCAACAAAGCCCAATTCTCCTATCTTGTCGTACGAGGTTGATCTCTCACCGATTCTCAAGGACTCCATGTACGTTGGATTCTCCTCTTCAACAGGGATGCTAGCTAGCTCTCACTATATCTTGGGCTGGAGCTTCAACATCAACAATGGAGACGCCAAAACCCTCTCCTTGAAGAACCTCCCTCCACTCCCTTCGCGAGACAAACCCCATAGAAGGTCCTTAATCTTAGGGCTCTCTCTCTCAGCTTCGATATTGCTCCTCTGCTCCATTGCCTTATCATTCTACCTCACCAAAAAGCTGAAAAACGCAGAAGTAATCGAACCGTGGGAGCTAGAAGTTGGTCCACATAGGTTCCCCTACAAGGAGCTGAAGAAAGCTACCAGAAACTTCCACCACAAGAACATGCTCGGCTTCGGCGGCTTCGGCGCGGTTTTCAAGGGAACACTGGCAAACAACACCGAAATCGCAGTGAAGCGAGTCTCCCATGACTCCAAACAGGGATTCCAAGAATTCGTGTCGGAAATCGAGACCATAGGCAGGTTGCGCCACAGGAACCTCGTACAGCTCCAAGGTTGGTGCAGAAACCAGATCGATCTTCTTTTAGTATACGACTTCATGCCAAACGGAAGCTTGGACAAGCACCTGTTCGAAGATTCACCAAGAAAAACGCTAACATGGGAACAGAGGTTCAAGATTGTGAAGGGCGTGGCTTGCGGACTCTTGTACCTTCACGAGGAATGGGAACAGACGGTGATTCACAGGGATATCAAAGCAGGGAACGTTCTGTTGGACGCTGACATGAACGCGCGCCTCGGCGACTTTGGTTTGGCCAAGCTATATGAGCGTGGTTCCAACCCGAGCACCACCAGGGTGGTAGGGACGCTGGGGTACCTTGCGCCGGAGCTAACGAGGACGGGGAGGCCAAGCACGTCTTCCGATGTTTATGCGTTTGGGGCGCTGCTGTTGGAGGTGGTGTGCGGGAGGAGGCCGGTGGAGGCGAAGGCGCTGCCGGAGGAGCTTGTTCTGGTGGAGTGGGTGTGGGACCGGTGGCGCTTGGGGGCGGTGTTGGAGGTGGTGGACCCCAAGCTTGGCGGAGTTTATGATGAGCTGGAGGTTGTGGTGGTTATCAAGTTGGGGTTGCTGTGTTCGTGTGAGGTGCCGGAAATGAGGCCAACTATGAGGCAGGTTGTGCGCTTCTTGGAAGGGGAGATCCCGTTGCCGGAGGGGATTCCTCCGCCGGATGGCTTTGGTGGTGGAAAGTCTGGACATTCGTATGGCGGGAACACGTGGTTGTCGCCGCTTGATGATGACGTGGAGGGTACAAGGGATGAGGATGGTAGCTAG 1995 0.5208 MKKKFNPPIMAKTLLLLFFLSALTSRITHQQEIFFEGFNGGEAAANMSLNGGAVIYQSGTLGLTNDTQKVVGHAFYSTPIQFKNKSKVVSFSTAFAFAIVPQYPTLGGHGFAFTIAPSKDLPNGYPSQYLGLLGPKNLGNFSNHLFAVEFDTVQDFEFGDISDNHVGVNLNNMASNKSVKATVLGQEELNLKSGKVIQAWVDYDSSKNQLEVRLSQTSTKPNSPILSYEVDLSPILKDSMYVGFSSSTGMLASSHYILGWSFNINNGDAKTLSLKNLPPLPSRDKPHRRSLILGLSLSASILLLCSIALSFYLTKKLKNAEVIEPWELEVGPHRFPYKELKKATRNFHHKNMLGFGGFGAVFKGTLANNTEIAVKRVSHDSKQGFQEFVSEIETIGRLRHRNLVQLQGWCRNQIDLLLVYDFMPNGSLDKHLFEDSPRKTLTWEQRFKIVKGVACGLLYLHEEWEQTVIHRDIKAGNVLLDADMNARLGDFGLAKLYERGSNPSTTRVVGTLGYLAPELTRTGRPSTSSDVYAFGALLLEVVCGRRPVEAKALPEELVLVEWVWDRWRLGAVLEVVDPKLGGVYDELEVVVVIKLGLLCSCEVPEMRPTMRQVVRFLEGEIPLPEGIPPPDGFGGGKSGHSYGGNTWLSPLDDDVEGTRDEDGS* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4190 664 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Amo13g4190 664 Pfam Legume lectin domain 34 276 IPR001220 GO:0030246
Amo13g4190 664 CDD STKc_IRAK 353 619 - -
Amo13g4190 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Amo13g4190 664 MobiDBLite consensus disorder prediction 627 664 - -
Amo13g4190 664 SMART serkin_6 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4190 664 Gene3D - 33 277 - -
Amo13g4190 664 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4190 664 PANTHER - 17 635 - -
Amo13g4190 664 SUPERFAMILY Protein kinase-like (PK-like) 329 625 IPR011009 -
Amo13g4190 664 Pfam Protein kinase domain 347 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4190 664 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Amo13g4190 664 Gene3D Transferase(Phosphotransferase) domain 1 423 625 - -
Amo13g4190 664 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 17 635 - -
Amo13g4190 664 CDD lectin_legume_LecRK_Arcelin_ConA 35 265 IPR001220 GO:0030246
Amo13g4190 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 270 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4190 Amo-Chr13 135787232 135789821 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4190 31 631 Receptor kinase-like Gene Family AT3G55550 60.458 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g4190 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4190 - - adu:107480854 1274.61