Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4185 ATGAAAAAGAAATTCAACCCTCCTATTATGGCAAAAACACTGCTGCTTCTTTTTTTCCTCTCAGCTCTGACCTCAAGGATTACTCACCAACAAGAGATCTTCTTTGAAGGCTTCAATGGTGGTGAAGCCGCCGCAAACATGTCCCTAAACGGTGGCGCAGTTATTTACCAAAGCGGCACACTTGGTTTAACAAACGACACTCAGAAGGTAGTTGGTCACGCGTTTTACTCGACCCCAATCCAATTCAAGAACAAGAGCAAAGTTGTCTCCTTTTCCACCGCATTTGCATTCGCAATAGTCCCTCAGTACCCAACACTCGGTGGCCATGGCTTCGCCTTCACCATTGCTCCCTCCAAAGACCTTCCCAACGGTTACCCAAGCCAGTACTTGGGCCTCCTCGGCCCAAAAAACCTCGGCAACTTCTCCAACCACCTCTTCGCGGTGGAGTTTGACACCGTTCAAGACTTCGAGTTCGGAGACATCAGTGACAATCACGTGGGCGTTAACCTCAACAACATGGCCTCCAACAAATCCGTTAAAGCAACCGTTTTGGGACAAGAAGAGCTGAACTTGAAGAGTGGCAAAGTGATTCAAGCATGGGTTGATTATGACTCCTCAAAGAACCAATTGGAGGTTCGTCTCTCCCAAACCTCAACAAARCCCAATTCTCCTATCTTGTCGTACGAGGTTGATCTCTCACCGATTCTCAAGGAYTCCATGTACGTTGGATTCTCCTCTTCAACAGGGATGCTAGCTAGCTCTCACTATATCTTGGGCTGGAGCTTCAACATCAACAATGGAGACGCCAAAACCCTCTCCTTGAAGAACCTCCCTCCACTCCCTTCGCGAGACAAACCCCATAGAAGGTCCTTAATCTTAGGGCTCTCTCTCTCAGCTTCGATATTGCTCCTCTGCTCCATTGCCTTATCATTCTACCTCACCAAAAAGCTGAAAAACGCAGAAGTAATCGAACCGTGGGAGCTAGAAGTTGGTCCACATAGGTTCCCCTACAAGGAGCTGAAGAAAGCTACCAGAAACTTCCACCACAAGAACATGCTCGGCTTCGGCGGCTTCGGCGCGGTTTTCAAGGGAACACTGGCAAACAACACCGAAATCGCAGTGAAGCGAGTCTCCCATGACTCCAAACAGGGATTCCAAGAATTCGTGTCGGAAATCGAGACCATAGGMAGGTTGCGCCACAGGAACCTCGTACAGCTCCAAGGTTGGTGCAGAAACCAWATCGATCTTCTSTTAGTATACGACTTCATGCCAAACGGAAGCTTGGACAAGCACCTGTTCGAAGATTCACCAAGAAAAACGCTAACATGGGAACAGAGGTTCAAGATTGTGAAGGGCGTGGCTTGCGGACTCTTGTACCTTCACGAGGAATGGGAACAGACGGTGATTCACAGGGATATCAAAGCAGGGAACGTTCTGTTGGACGCTGACATGAACGCGCGCCTCGGCGACTTTGGTTTGGCCAAGCTATATGAGCGTGGTTCCAACCCGAGCACCACCAGGGTGGTAGGGACGCTGGGGTACCTTGCGCCGGAGCTAACGAGGACGGGGAGGCCAAGCACGTCTTCCGATGTTTATGCGTTTGGRGCGCTGCTGTTGGAGGTGGTGTGCGGGAGGAGGCCGGTGGAGGCGAAGGCGCTGCCGGAGGAGCTTGTTCTGGTGGAGTGGGTGTGGGACCGGTGGCGCTTGGGGGCGGTGTTGGAGGTGGTGGACCCCAAGCTTGGCGGAGTTTATGATGAGCTGGAGGTTGTGGTGGTTATCAAGTTGGGGTTGCTGTGTTCGTGTGAGGTGCCGGAAATGAGGCCAACTATGAGGCAGGTTGTGCGCTTCTTGGAAGGGGAGATCCCGTTGCCGGAGGGGATTCCTCCGCCGGATGGCTTTGGTGGTGGAAAGTCTGGACATTCGTATGGCGGGAACACGTGGTTGTCGCCGCTTGATGATGAGAAACAAAAAGTATTGTCACCACATCAATATAATTAA 1998 0.512 MKKKFNPPIMAKTLLLLFFLSALTSRITHQQEIFFEGFNGGEAAANMSLNGGAVIYQSGTLGLTNDTQKVVGHAFYSTPIQFKNKSKVVSFSTAFAFAIVPQYPTLGGHGFAFTIAPSKDLPNGYPSQYLGLLGPKNLGNFSNHLFAVEFDTVQDFEFGDISDNHVGVNLNNMASNKSVKATVLGQEELNLKSGKVIQAWVDYDSSKNQLEVRLSQTSTKPNSPILSYEVDLSPILKDSMYVGFSSSTGMLASSHYILGWSFNINNGDAKTLSLKNLPPLPSRDKPHRRSLILGLSLSASILLLCSIALSFYLTKKLKNAEVIEPWELEVGPHRFPYKELKKATRNFHHKNMLGFGGFGAVFKGTLANNTEIAVKRVSHDSKQGFQEFVSEIETIGRLRHRNLVQLQGWCRNXIDLLLVYDFMPNGSLDKHLFEDSPRKTLTWEQRFKIVKGVACGLLYLHEEWEQTVIHRDIKAGNVLLDADMNARLGDFGLAKLYERGSNPSTTRVVGTLGYLAPELTRTGRPSTSSDVYAFGALLLEVVCGRRPVEAKALPEELVLVEWVWDRWRLGAVLEVVDPKLGGVYDELEVVVVIKLGLLCSCEVPEMRPTMRQVVRFLEGEIPLPEGIPPPDGFGGGKSGHSYGGNTWLSPLDDEKQKVLSPHQYN* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4185 665 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Amo13g4185 665 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Amo13g4185 665 Pfam Legume lectin domain 34 276 IPR001220 GO:0030246
Amo13g4185 665 PANTHER - 17 635 - -
Amo13g4185 665 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4185 665 SUPERFAMILY Protein kinase-like (PK-like) 329 625 IPR011009 -
Amo13g4185 665 CDD STKc_IRAK 353 619 - -
Amo13g4185 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Amo13g4185 665 SMART serkin_6 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4185 665 Gene3D - 33 277 - -
Amo13g4185 665 Pfam Protein kinase domain 347 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g4185 665 CDD lectin_legume_LecRK_Arcelin_ConA 35 265 IPR001220 GO:0030246
Amo13g4185 665 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 17 635 - -
Amo13g4185 665 MobiDBLite consensus disorder prediction 625 665 - -
Amo13g4185 665 Gene3D Transferase(Phosphotransferase) domain 1 423 625 - -
Amo13g4185 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 270 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4185 Amo-Chr13 135558836 135561369 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4185 31 631 Receptor kinase-like Gene Family AT3G55550 60.458 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g4185 Pkinase 8.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4185 - - adu:107480854 1259.2