Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4118 ATGTCCCACACTACATTTACCTTCCTCTTCTGCTTCCTATCACTCCTCTTCTCTTCTTCCTTCGCCGCTCATCACCGCCATCTTCTCCACCACCCACTCTTCCCGGCGCCTTCACTCCCCATCCCCATTCCCCCAACACAACCACCATCTCCCTCTCCTCAACCACAACCACAACCACAACACCAACAACCCAAGCTTCCATCCTCTTCTATTACATCACCTTCCTCACCGTCTTCTTCTTCCTCACCAAACAACCATTTCTTCTTTCCTACCTACCGCCCCTCTCCACCTCCTCCATCACCCTCCGTCGTCGCCACATTCCCGGCTAACATCTCCTCCCTCCTCCTCCCACATCCTACCTCCAGCCACCACCGTCCCGCTCTCGCACTTGCTCTCACCCTCTCTCTTGTTTCCCTCGCCCTCCTCTCCGCCGCTGCCGCATTCGCACTCCACCGCCGCTCCCGCACCTCGTCATCCTTCCACGCCGACGATGACGAAGACGACGACAAGGCCTCCAGGCAAGATAGCCTCCGCCTGTTCCCACGCAACGCTGCCACCTCCGACGGCACCCACCCCAAGCCCCGCGGCGGCCCCGGCGCCGCCTCAAGCCCGCGCACAGATTACCTCTACCTCGGCACGGTGGCTAGTTCAGAGCCACCGGATTCAAGCTCCAGCAGCACCACCGGAACCTTGATGGTGCCGCCGTACCGAAAACTGAATGATTCGCCGGAACTGAAACCACTGCCTCCCCTGCCCCGCCACAATTTCCGGCCATGGCTGAGTGAAGAAGAAGACAAGGACGAAAAACACAAGGAGAATCAAGACGAAGAAGAGGAACAGTTCTTTTCTCCGAGAGGCTCTTCCGGTAACAGACAAGAGAGTCCTCCTTCCCCTGTTGCGGTTCTTGGAGTCGAAGATTCAAGTTCTCGTTCACCGGAGGCTTTTCCTTTGGAGAAACTCGGATGCAGAAGCTTAAACTCAAGAACCCCATCTCATTCTCGTTCTTGTTCCCCTCACAGCCCTGAAAGCACCAAATCACTGCCACCACCTAATCAGAACCCAGTTTCTGCGTCGCAGTCGCCGTCTTCTTTGTGTTCTTCTTCTTCTTCTCCTAAGCCTAGAGAGGAGTTGAGATCCAGTTGGGATGTTCCGGCCACCGAACTGCCTCCTCCTCCTCCTCCGCCACCACCACCGCCGCCTCCGCCGAGGTTCTGGGAGACTCCGGTGATGAATAAATTGGCGCCAAATGTTGATAAGAATGAGAGTGAGGAAACTCCGAAGCCAAAGTTAAAAGCTTTGCATTGGGATAAAGTGAAAGCTAGTTCTGATAGGGCAACGGTGTGGGATCGCTTGAGACCAAGTTCTTTCCAATTGAACGAGGACATGATTGAGACGCTGTTCATGGTTAATAACTCAAAGGAAAATCCTACATTGGCTTTTAGAGATAATAATGGCCGCCGTGGTCAAACGGTTCATTCTTCACCGGTGCCGCCGGAGAATAGGGTGCTTGACCCCAAGAAGTCTCAGAACATTGCTATTTTGCTTAGGGCGCTCAATGTAACTATTGATGAAGTTTGTGAAGCTCTCAGGGAAGGCAACTGTGATACACTGGGAACAGAACTTCTGGAGAGTTTGTTGAAGATGGCTCCAACCAAAGAAGAAGAAACTAAGCTGAGGGAGTTCCAAGACGAATCGCCCTTCAAGCTTGGACCTGCTGAGAAATTTCTCAAGATCATGCTTGATATACCTTTTGCATTTAAGAGAGTGGAAGCTATGCTCTACATTGCTAATTTTGATTCTGAATTAGAATACCTTAAAAAGTCCTTTGAGACTCTGGAGGTGGCTTGTGAGGAATTGAGGAACAGCAGAATGTTTTTGAAGTTACTTGAAGCTGTTCTCAGAACTGGAAACCGAATGAATGTTGGCACTGATCGGGGCGATGCGCATGCATTCAAGCTGGACACGCTTCTGAAGCTCGTTGATATTAAAGGAACTGATGGAAAGACCACTCTATTGCATTTTGTTGTACAGGAAATCGTCAGAACCGAGGGATCTCATATTTCCGGTTCTAACAATCATCAGGCCTCCGAGAACAACCAGCAATATACTCTTCAAGATGAGGTTGAATTCCGGAAGCTTGGACTGCAAGTTGTTTCGGGCTTGAGTGGTGAGCTCACCAATGTGAAAAAAACAGCTACCATGGACTCAGACATGCTTAGCAGCGATGTTGCTAAACTTGCTAAGGGGATCGAGAAAGTTGTGGAAGTTGTCAAACTGAATGAAATGTCACCCTTGAAAGACACTAGCCAAAAGTTTTCTGAGGCAATGAAATGTTTCTTGGAGAAAGGAGGAGAAGAAATTTTAAGAATCCAGAACCAAGAGAAAAGGGCTCTCTCTTCAGTAAAGGAGATAACTGAGTATTTCCATGGGAATTCAGCAAAGGAAGAAGCTCATCCGTTTAGGATTTTTATGGTAGTGAGGGATTTCCTTTCGATATTAGATGGTGTGTGCAAGGAAGTTGGGAAAGCAAATGAGAGGACTCTAGTTGGTTCTAGACAATCTGTAATGCCTGCAAACCCTGTAACGCCAGCAATTTTTCCTATTATTACTGGTAAGCAGCCATGTGATTCATCTGAATCTGATTAA 2646 0.4936 MSHTTFTFLFCFLSLLFSSSFAAHHRHLLHHPLFPAPSLPIPIPPTQPPSPSPQPQPQPQHQQPKLPSSSITSPSSPSSSSSPNNHFFFPTYRPSPPPPSPSVVATFPANISSLLLPHPTSSHHRPALALALTLSLVSLALLSAAAAFALHRRSRTSSSFHADDDEDDDKASRQDSLRLFPRNAATSDGTHPKPRGGPGAASSPRTDYLYLGTVASSEPPDSSSSSTTGTLMVPPYRKLNDSPELKPLPPLPRHNFRPWLSEEEDKDEKHKENQDEEEEQFFSPRGSSGNRQESPPSPVAVLGVEDSSSRSPEAFPLEKLGCRSLNSRTPSHSRSCSPHSPESTKSLPPPNQNPVSASQSPSSLCSSSSSPKPREELRSSWDVPATELPPPPPPPPPPPPPPRFWETPVMNKLAPNVDKNESEETPKPKLKALHWDKVKASSDRATVWDRLRPSSFQLNEDMIETLFMVNNSKENPTLAFRDNNGRRGQTVHSSPVPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEETKLREFQDESPFKLGPAEKFLKIMLDIPFAFKRVEAMLYIANFDSELEYLKKSFETLEVACEELRNSRMFLKLLEAVLRTGNRMNVGTDRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGSNNHQASENNQQYTLQDEVEFRKLGLQVVSGLSGELTNVKKTATMDSDMLSSDVAKLAKGIEKVVEVVKLNEMSPLKDTSQKFSEAMKCFLEKGGEEILRIQNQEKRALSSVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKANERTLVGSRQSVMPANPVTPAIFPIITGKQPCDSSESD* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4118 881 MobiDBLite consensus disorder prediction 39 62 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 324 342 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 349 374 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 385 406 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 63 89 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 257 282 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 477 503 - -
Amo13g4118 881 SUPERFAMILY Formin homology 2 domain (FH2 domain) 391 846 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 216 233 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 477 496 - -
Amo13g4118 881 Gene3D Formin, FH2 domain 427 857 IPR042201 -
Amo13g4118 881 Coils Coil 260 280 - -
Amo13g4118 881 PANTHER FORMIN-RELATED 10 878 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo13g4118 881 Pfam Formin Homology 2 Domain 422 833 IPR015425 -
Amo13g4118 881 ProSiteProfiles Formin homology-2 (FH2) domain profile. 420 859 IPR015425 -
Amo13g4118 881 MobiDBLite consensus disorder prediction 156 176 - -
Amo13g4118 881 SMART it6_source 420 848 IPR015425 -
Amo13g4118 881 MobiDBLite consensus disorder prediction 39 93 - -
Amo13g4118 881 MobiDBLite consensus disorder prediction 153 408 - -
Amo13g4118 881 PANTHER FORMIN-LIKE PROTEIN 2 10 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4118 Amo-Chr13 134373570 134377165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4118 422 873 FH2 protein (formin) Gene Family AT3G25500 66.886 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4118 - - adu:107480832 1361.67