Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4103 ATGTCCCACACTACATTTACCTTCCTCTTCTGCTTCCTATCACTCCTCTTCTCTTCTTCCTTCGCCGCTCATCACCGCCATCTTCTCCACCACCCACTCTTCCCGGCGCCTTCACTCCCCATCCCCATTCCCCCAACACAACCACCATCTCCCTCTCCTCAACCACAACCACAACCACAACCACAACACCAACAACCCAAGCTTCCATCCTCTTCTATTACATCACCTTCCTCACCGTCTTCTTCTTCCTCACCAAACAACCATTTCTTCTTTCCTACCTACCGCCCCTCTCCACCTCCTCCATCACCCTCCGTCGTCGCCACATTCCCGGCTAACATCTCCTCCCTCCTCCTCCCACATCCTACCTCCAGCCACCACCGTCCCGCTCTCGCACTTGCTCTCACCCTCTCTCTTGTTTCCCTCGCCCTCCTCTCCGCCGCTGCCGCATTCGCACTCCACCGCCGCTCCCGCACCTCGTCATCCTTCCACGCCGACGATGACGAAGACGACGACAAGGCCTCCAGGCAAGATAGCCTCCGCCTGTTCCCACGCAACGCTGCRACCTCCGACGGCACCCACCCCAAGCCCCGCGGCGGCCCCGGCGCCGCCTCAAGCCCGCGCACAGATTACCTCTACCTCGGCACGGTGGCTAGTTCAGAGCCACCGGATTCAAGCTCCAGCAGCACCACCGGAACCTTGATGGTGCCGCCGTACCGAAAACTGAATGATTCGCCGGAACTGAAACCACTGCCTCCCCTGCCCCGCCACAATTTCCGGCCATGGCTGAGTGAAGAAGAAGACAAGGACGAAAAACACAAGGAGAATCAAGACGAAGAAGAGGAACAGTTCTTTTCTCCGAGAGGCTCTTCCGGTAACAGACAAGAGAGTCCTCCTTCCCCTGTTGCGGTTCTTGGAGTCGAAGATTCAAGTTCTCGTTCACCGYAGGCTTTTCCTTTGGAGAAACTCGGATGCAGAAGCTTAAACTCAAGAACCCCATCTCATTCTCMTTCTTGTTCCCCTCTCAGCCCTGAAAGCACCAAATCACTGCCACCACCTAATCAGAACCCAGTTTCTGCGTRGCAGTCGCCGTCTTCTTTGTGTTCTTCTTCTTCTTCTCCTAAGCCTAGAGAGGAGTTGAGATCCAGTTGGGATGTTCCGGCCACCGAACTGCCTCCTCCTCCTCCTCCGCCACCACCACCGCCGCCTCCGCCGCGGTTCTGGGAGACTCCGGTGATGAATAAATTGGCGCCAAATGTTGATAAGAATGAGAGTGAGGAAACTCCGAAGCCAAAGTTAAAAGCTTTGCATTGGGATAAAGTGAAAGCTAGTTCTGATAGGGCAACGGTGTGGGATCGCTTGAGACCAAGTTCTTTCCAATTGAACGAGGACATGATTGAGACGCTGTTCATGGTTAATAACTCAAAGGAAAATCCTACATTGGCTTTTAGAGATAATAATGGCCGCCGTGGTCAAACGGTTCATTCTTCACCGGTGCCYCCGGAGAATAGGGTGCTTGACCCCAAGAAGTCTCAGAACATTGCTATTTTGCTTAGGGCGCTCAATGTAACTATTGATGAAGTTTGTGAAGCTCTCAGGGAAGGCAACTGTGATACACTGGGAACAGAACTTCTGGAGAGTTTGTTGAAGATGGCTCCAACCAAAGAAGAAGAAACTAAGCTGAGGGAGTTCCAAGACGAATCGCCCTTCAAGCTTGGKCCTGCTGAGAAATTTCTSAAGATCATGCTTGATATACCTTTTGCATTTAAGAGAGTGGAAGCTATGCTCTACATTGCTAATTTTGATTCTGAATTAGAATACCTTAAAAAGTCCTTTGAGACTCTGGAGGTGGCTTGTGAGGAATTGAGGAACAGCAGAATGTTTTTGAAGTTACTTGAAGCTGTTCTCAGAACTGGAAACCGAATGAATGTTGGCACTGATCGGGGCGATGCGCATGCATTCAAGCTGGACACYCTTCTGAAGCTCGTTGATATTAAAGGAACRGATGGAAAGACCACTCTATTGCATTTTGTTGTACAGGAAATRGTCAGAACCGAGGGATCTCATATTTCCGGTTCTAACAATCATCKGGCCTCCGAGAACAACCAGCAATATACTCTTCAAGATGAGGTTGAATTCCGGAAGCTTGGACTGCAAGTTGTTTCGGGCTTGAGTGGTGAGCTCACCAATGTGAAAAAAACAGCTACCATGGACTCAGACATGCTTAGCAGCGATGTTGCTAAACTTGCTAAGGGGATCGAGAAAGTTGTGGAAGTTGTCAAACTGAATGAAATGTCACCCTTGAAAGACACTAGCCAAAAGTTTTCTGAGGCAATGAAATGTTTCTTGGAGAAAGGAGGAGAAGAAATTTTAAGAATCCAGAACCAAGAGAAAAGGGCTCTCTCTTCAGTAAAGGAGATAACTGAGTATTTCCATGGGAATTCAGCAAAGGAAGAAGCTCATCCGTTTAGYATTTTTATGGTAGTGAGGGATTTCCTTTCGATATTAGATGGTGTGTGCAAGGAAGTTGGGAAAGCYAATGAGAGGACTCTAGTTGGTTCTAGACAATCTGTAATGCCTGCAAACCCTGTAACGCCAGCAATTTTTCCTATTATTACTGGTAAGCAGCCATGTGATTCATCTGAATCTGATTAA 2652 0.4906 MSHTTFTFLFCFLSLLFSSSFAAHHRHLLHHPLFPAPSLPIPIPPTQPPSPSPQPQPQPQPQHQQPKLPSSSITSPSSPSSSSSPNNHFFFPTYRPSPPPPSPSVVATFPANISSLLLPHPTSSHHRPALALALTLSLVSLALLSAAAAFALHRRSRTSSSFHADDDEDDDKASRQDSLRLFPRNAATSDGTHPKPRGGPGAASSPRTDYLYLGTVASSEPPDSSSSSTTGTLMVPPYRKLNDSPELKPLPPLPRHNFRPWLSEEEDKDEKHKENQDEEEEQFFSPRGSSGNRQESPPSPVAVLGVEDSSSRSPXAFPLEKLGCRSLNSRTPSHSXSCSPLSPESTKSLPPPNQNPVSAXQSPSSLCSSSSSPKPREELRSSWDVPATELPPPPPPPPPPPPPPRFWETPVMNKLAPNVDKNESEETPKPKLKALHWDKVKASSDRATVWDRLRPSSFQLNEDMIETLFMVNNSKENPTLAFRDNNGRRGQTVHSSPVPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEETKLREFQDESPFKLGPAEKFLKIMLDIPFAFKRVEAMLYIANFDSELEYLKKSFETLEVACEELRNSRMFLKLLEAVLRTGNRMNVGTDRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEXVRTEGSHISGSNNHXASENNQQYTLQDEVEFRKLGLQVVSGLSGELTNVKKTATMDSDMLSSDVAKLAKGIEKVVEVVKLNEMSPLKDTSQKFSEAMKCFLEKGGEEILRIQNQEKRALSSVKEITEYFHGNSAKEEAHPFSIFMVVRDFLSILDGVCKEVGKANERTLVGSRQSVMPANPVTPAIFPIITGKQPCDSSESD* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4103 883 Coils Coil 262 282 - -
Amo13g4103 883 MobiDBLite consensus disorder prediction 479 498 - -
Amo13g4103 883 Gene3D Formin, FH2 domain 429 859 IPR042201 -
Amo13g4103 883 MobiDBLite consensus disorder prediction 39 96 - -
Amo13g4103 883 MobiDBLite consensus disorder prediction 39 64 - -
Amo13g4103 883 Pfam Formin Homology 2 Domain 424 835 IPR015425 -
Amo13g4103 883 SUPERFAMILY Formin homology 2 domain (FH2 domain) 393 848 - -
Amo13g4103 883 PANTHER FORMIN-RELATED 10 880 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo13g4103 883 MobiDBLite consensus disorder prediction 326 344 - -
Amo13g4103 883 PANTHER FORMIN-LIKE PROTEIN 2 10 880 - -
Amo13g4103 883 ProSiteProfiles Formin homology-2 (FH2) domain profile. 422 861 IPR015425 -
Amo13g4103 883 MobiDBLite consensus disorder prediction 351 376 - -
Amo13g4103 883 MobiDBLite consensus disorder prediction 387 408 - -
Amo13g4103 883 MobiDBLite consensus disorder prediction 65 91 - -
Amo13g4103 883 MobiDBLite consensus disorder prediction 479 505 - -
Amo13g4103 883 MobiDBLite consensus disorder prediction 259 284 - -
Amo13g4103 883 MobiDBLite consensus disorder prediction 160 429 - -
Amo13g4103 883 SMART it6_source 422 850 IPR015425 -
Amo13g4103 883 MobiDBLite consensus disorder prediction 160 178 - -
Amo13g4103 883 MobiDBLite consensus disorder prediction 218 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4103 Amo-Chr13 134196911 134200464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4103 424 875 FH2 protein (formin) Gene Family AT3G25500 66.447 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4103 - - adu:107480832 1389.4