Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4050 ATGGATCTGTTCACCACCATCATGTTACCATCTTTATTCATTATCCTACTCATCATCATGAAATGGCAGTATTCCAAACCCACAAACAAAAACTCACCCCCTTCACCTCCAAAACTACCCATACTCGGAAACTTGCACCAAGTAGGTTTGTTCCCGCACCTGTCACTCAAAAGCTTGGCTGAGAAACATGGCCCCTTGATGCTCCTTCACTTTGGCAACGTTCCAGTGTTGGTGGTGTCTTCGGCCAACATGGCGGAAGAGGTGATGAAGACCCACGACTTGGTGTTCTCCAACCGGCCACCGCGTAAGATGAGTGACATACTCTTGTATGATTCCAAGGACATAGCCACCTCTCCGTATGGTGAATACTGGAGGCAGATGAGGAGCCTAGCCGTGTTGCACCTTCTGAGCAACAAAAGGGTTCAATCGTACAGTCGTGTTAGGGAAGAAGAAGCTGCAAGAATGGTTGAAACCATCAAAGAGTTTGCTTCTTCTTCTTCTATGCCCTTAAACTTGTCTGACATATTCTTCGGTGTTACAAATGACATACTGTGTAGAAGTGCTCTAGGGAGGAGATATCGTGGAGGAGGAGAAGGGTGCAAGTTTCAGGAGCTGGTTTTGGAGTTTGGAGACTTGTTGGGTACAACATCAATAGGAGACTATATTCCATGGCTTAGTTGGTTGAACAAGGTTGATGGTTCTTATAGAAGAGCATCAAGAGTGGCCAAGCGTCTTGATGAGTTTTTGGATCAAGTGATTGCGGAGCATGTTAGTTCTGGGAAAAGGAAAGAACAAGAGGGACTTACTGATAGTGTTGATGATTTTGTGGATGTTTTGCTTTCTGTCAAGACCAGTAACGCTGTTGGATTTGAGTTTGACACAATAACAATGAAGGCAATACTCGTGGACATGTTTACGGCAGGTACGGACCCTACGTACACTGTGCTAGAATGGGCAATGGCGGAACTGTTAAAACGGCCAGCGGTTATGCACAAACTTCAAGATGAAGTGAGAACTGTTGTTGGAAACAGAAGCAACATAACCGAACAAGATTTGGTTCACATGAACTACTTGAAAGCTGTGATCAAAGAAACACTTCGGTTGCACCCTTCACTTCCAGTTCTAGTTCCTAGAGAATCCACCAAAGGCATCAAGTTGAATGGATATGACATTGAAGCTGGAACACAGGTGTTGGTGAATGCATGGGCCGTTGCAACGGACCCAAAGTGTTGGGACCAGCCACTTGAGTTCAAGCCAGAGAGGTTCTTAAACAGTTCGGTGGATTTCAAAGGGCGTGATTTTCAGTTTATTCCTTTTGGTGCAGGAAGGAGAGGGTGCCCTGGGATGCAGTTTGCCACTGCTCTTGATGAAATTGTGCTGGCTAACCTTGTTTATCACTTTGATTGGGATTTGCCTGCTGGTTCTAAGGAATTGGACTTGTCTAAATTTTATGGACTAGTCCTGCATTTGAAATCAACTCTCTTGGCTATACCAACCCCTTATTATGAATGA 1512 0.4484 MDLFTTIMLPSLFIILLIIMKWQYSKPTNKNSPPSPPKLPILGNLHQVGLFPHLSLKSLAEKHGPLMLLHFGNVPVLVVSSANMAEEVMKTHDLVFSNRPPRKMSDILLYDSKDIATSPYGEYWRQMRSLAVLHLLSNKRVQSYSRVREEEAARMVETIKEFASSSSMPLNLSDIFFGVTNDILCRSALGRRYRGGGEGCKFQELVLEFGDLLGTTSIGDYIPWLSWLNKVDGSYRRASRVAKRLDEFLDQVIAEHVSSGKRKEQEGLTDSVDDFVDVLLSVKTSNAVGFEFDTITMKAILVDMFTAGTDPTYTVLEWAMAELLKRPAVMHKLQDEVRTVVGNRSNITEQDLVHMNYLKAVIKETLRLHPSLPVLVPRESTKGIKLNGYDIEAGTQVLVNAWAVATDPKCWDQPLEFKPERFLNSSVDFKGRDFQFIPFGAGRRGCPGMQFATALDEIVLANLVYHFDWDLPAGSKELDLSKFYGLVLHLKSTLLAIPTPYYE* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4050 503 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 500 - -
Amo13g4050 503 SUPERFAMILY Cytochrome P450 33 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PANTHER CYTOCHROME P450 71B11-RELATED 6 500 - -
Amo13g4050 503 Pfam Cytochrome P450 33 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g4050 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4050 Amo-Chr13 133458112 133466863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4050 3 501 Cytochrome P450 AT3G48280 47.809 4.90e-172 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4050 - - gmx:100819183 624.394